Sphingomonas sp. AAP5: E2E30_10535
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Entry
E2E30_10535 CDS
T10507
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
saap Sphingomonas sp. AAP5
Pathway
saap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E2E30_10535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saap03021
]
E2E30_10535
03400 DNA repair and recombination proteins [BR:
saap03400
]
E2E30_10535
Enzymes [BR:
saap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E2E30_10535
Transcription machinery [BR:
saap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E2E30_10535
DNA repair and recombination proteins [BR:
saap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E2E30_10535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
QBM76157
UniProt:
A0A4P6X7V6
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All DBs
Position
complement(2286208..2287272)
Genome browser
AA seq
354 aa
AA seq
DB search
MSVNAKNWQELKKPSGLEKKSGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAAV
TSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALRMQGEGPKRLQLSATGPGAVTAGDIA
VTGDIEVMNPKLVLCHLDEGATLNMEFTADVGKGYVAAVANRPADAPIGLIPVDALYSPV
KQVSYKVENTRVGQELDYDKLTLTIETDGTITPEDAVGYAGRILQDQLALFVHFDDSSVT
RSAPIGHAAPAAAAGEVSGDTQQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMEIPGWPPENIEEMAKKLEQEIMG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaatgcaaagaactggcaggaactgaagaagccgtccggcctcgagaagaag
tccggtgatggcaagcgcaaggcaaccttcgtcgccgagccgctggagcgtggtttcggc
ctgacgctcggcaacgcgctgcgccgcgttctgctgtcgtcgctgcagggggcagcggtc
acctcgatcaagatcgaaaacgtgctgcacgaattctcgtcgcttgccggcgttcgcgag
gacgtgaccgatatcgtgctcaacgtgaagcagatcgctttgcgcatgcagggcgagggg
cccaagcgcctccagctctcggcaacgggtccgggtgcggtcacggctggcgacatcgcg
gtgacgggcgacatcgaagtgatgaaccccaagctggtgctgtgccacctcgacgagggc
gcgacgctcaacatggaattcaccgctgacgtcggcaagggctatgtcgctgccgtcgcc
aaccgtccggccgatgcgccgatcggcctgatcccggtcgatgcgctgtattcgccggtc
aagcaggtgagctacaaggtcgagaacacccgcgtcgggcaggaactcgattacgacaag
ctcacgctgacgatcgagaccgacggcacgatcacgcctgaggacgccgttggttacgca
ggacgcatcctgcaggaccagctcgcgctgttcgtccacttcgacgattcgtcggtgacg
cgttcggctccgatcggtcacgctgctccggcggctgcggctggcgaagtgtcgggcgac
acgcagcagatcaaccgctatttgctcaagaaggtcgacgagctcgagctttcggtgcgc
agcgccaactgcctcaagaacgacaacatcatctatatcggcgatctggtccagaagacc
gaagccgagatgctgcgtacgccgaacttcggccgcaagtcgctcaacgagatcaaggaa
gtgctgtcttcgatggggctccgcctcgggatggaaatcccgggttggccgcctgagaac
atcgaagagatggcgaagaagctcgagcaggaaattatgggctga
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