Sphingomonas sp. AAP5: E2E30_11745
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Entry
E2E30_11745 CDS
T10507
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
saap Sphingomonas sp. AAP5
Pathway
saap00470
D-Amino acid metabolism
saap00550
Peptidoglycan biosynthesis
saap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E2E30_11745 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E2E30_11745 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
saap01011
]
E2E30_11745 (murD)
Enzymes [BR:
saap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
E2E30_11745 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
saap01011
]
Precursor biosynthesis
Amino acid ligase
E2E30_11745 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
GldM_4th
VMAP-C
Motif
Other DBs
NCBI-ProteinID:
QBM76373
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Position
complement(2520263..2521564)
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AA seq
433 aa
AA seq
DB search
MIVSPLWRGKSFAVLGLARSGAASVHALLAGGARVVAWDTDEQRRDHIRARAVGQDLVLA
DPLEVDLADFDALIVSPGVPLNRHPVAAKARAAGIPIIGDIELFAQARPALPAHKVVGIT
GTNGKSTTTALVHHILQNAGISSLMGGNIGLPVLEQTPLPEGGVYVLELSSYQIDLTVSL
DCEVAVLLNLTPDHLDRYDGFAAYAASKAGLFAMQATTHDAIIGIGDTPSALIARSLSGR
GEHLTKIAPGVCMDQSRWPSLQGPHNAQNALAAIAVCQALGVPEAMIDRGLESFAGLPHR
MERVAVRGGVTFVNDSKATNPESTAPALAAFTRIHWLLGGKAKSDDLDACAPSFGDVVHA
YTIGDAAQTFAAILDGKIPVTVSGDLATAVAQAAANAQPGDTVLLSPACASFDQFRDFED
RGDQFRAAVEALA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtctcgcccctctggcgcggcaagagcttcgctgtgctggggctcgcacgctcg
ggcgcagcgagcgtgcacgcgttgctcgctggcggcgcgcgagtcgttgcgtgggatacc
gatgagcagcgacgcgaccacatccgcgctcgcgcagtcgggcaagatctggtgttggcc
gacccgctcgaggtcgatcttgccgatttcgacgcgttgatcgtctcccccggcgttccg
ctcaaccgtcatcccgtcgccgcgaaggcgcgcgccgccggcattccgatcatcggcgat
atcgaactgttcgcgcaggcgcggccagcgctccccgcgcacaaggtcgtcggcatcacc
ggaaccaacggcaagtcgaccaccaccgcgcttgtccaccacatcctgcagaacgcgggg
atctccagcctgatgggcggcaatatcggcctgccggtcctcgaacagaccccgttgccc
gaaggcggcgtctatgtgctcgaactgtcgagctaccagatcgaccttaccgtcagcctc
gattgcgaagtcgcggtgctgctcaacctgacgcccgaccatctcgaccgctatgacggg
tttgccgcctacgccgcgtcgaaggcagggctgttcgcgatgcaggccacgacgcacgac
gccattatcggcatcggcgataccccctcggcgctgatcgcgcgcagcctttcgggacgt
ggcgagcatctcaccaagatcgcgccgggcgtgtgcatggaccagtcgcgctggccgagc
ctgcaggggccgcacaatgcgcagaacgcgctcgccgcgattgcggtatgccaggcgctc
ggcgtgcccgaggcgatgatcgatcgcgggctcgaaagcttcgccggcctgccgcaccgg
atggagcgcgtcgcggtgcggggcggcgtcacgttcgtcaacgacagcaaggcgaccaac
cccgaatcgaccgcgcccgcgctcgcggcgttcacgcggatccactggctcctcggcggc
aaggccaagtcggacgatctcgatgcctgcgctccgtcgttcggcgatgtcgtccacgct
tataccatcggcgacgccgcgcagacgttcgccgcgatcctcgacggcaagatccccgtg
acggtgagcggcgacctcgccaccgccgtcgcgcaggccgccgccaacgcgcagccgggc
gacaccgtcctgctgtcgccggcgtgcgcctcgttcgaccagttccgcgatttcgaggat
cgcggcgaccagttccgcgccgcggtcgaggcgctggcgtga
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