Sphingomonas sp. AAP5: E2E30_12150
Help
Entry
E2E30_12150 CDS
T10507
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
saap Sphingomonas sp. AAP5
Pathway
saap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2E30_12150 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saap03019
]
E2E30_12150 (pnp)
03016 Transfer RNA biogenesis [BR:
saap03016
]
E2E30_12150 (pnp)
Enzymes [BR:
saap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E2E30_12150 (pnp)
Messenger RNA biogenesis [BR:
saap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E2E30_12150 (pnp)
Transfer RNA biogenesis [BR:
saap03016
]
Prokaryotic type
tRNA degradation factors
E2E30_12150 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
QBM76444
LinkDB
All DBs
Position
2611185..2613563
Genome browser
AA seq
792 aa
AA seq
DB search
MFDTKTVTTQWGGKTLTLETGRVARQADGAVMATLGETVVLCAVTAAKGVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEINVICQVLSY
DGENEPDVLAMVAASAALTISGVPFMGPIGAARVGYIDGEYILNPTVEQTKSGELDLVVA
ATGQAVMMVESEAKELSEEVMLGAVQFAHKACREAANLIIDLAEQAAKDPWEMAAQADLT
AAKDKLRKLVGKDIAAAYKVTDKGQRSHLLYEVRAKAREAFADAAPQDQMAAGKLVKKLE
GEIVRGAILKDGTRIDGRTTTQIRPIEAMVHFLPRAHGSALFTRGETQSICTTTLGTKDA
EQMIDGLTGLSYENFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPSKDEF
PYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGKDFAVLSDI
LGDEDHLGDMDFKVAGTEAGITTMQMDIKIAGITEEIMRVALAQAKEGRAHILGEMAKAL
DHTREELSAHAPRIETFTIDKTKIRDVIGTGGKVIREIVATTGAKVDIDDEGVIKVSSSD
TAQIEAAIKWIKGIVEEAEVGKVYDGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNERVEK
VSDVLSEGQEVKVKVLEIDPRGKVRLSMRVVDQETGAELEDTRPAREPREGGDRGPRPPR
RDGDGGRGPGGGDRGPRGGGGGGEGRGPRRDGDGGRGPRRDGGGARPERAAGGNEDGPAP
EFAPAFLTGDRD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataccaagaccgtaaccacccaatggggtggcaagacgctgacgctggaaacc
ggccgcgtcgcgcgccaggcagacggcgccgtgatggcgacgctcggcgagaccgtggtg
ctttgcgccgtgaccgccgccaagggcgtgaaggaaggccaggacttcttcccgctgacc
gtccattaccaggaaaaatattcggctgccggccgcatccccggtggcttcttcaagcgt
gagcgcggcgcgaccgaaaaggaaacgctgaccagccgcctgatcgaccgcccgatccgc
ccgttgttccccgaagggttctacaacgagatcaacgtgatctgccaggttctgtcgtat
gacggcgagaacgagcccgacgtgctcgcgatggtcgccgcatcggctgcgctgacgatc
tcgggcgtgcccttcatgggcccgatcggcgcagcgcgcgtcggctacatcgacggcgag
tacatcctcaacccgaccgtcgagcagaccaagtcgggcgagctcgacctcgtcgtcgcc
gcaaccggccaggccgtgatgatggtcgagtccgaagccaaggagctttcggaagaggtc
atgctcggtgccgtccagttcgcgcacaaggcatgccgcgaagccgcgaacctgatcatc
gatctggccgagcaggctgccaaggatccgtgggaaatggccgcccaggccgatctcacc
gccgccaaggacaagctgcgcaagctcgtcggcaaggacattgccgctgcctacaaggtg
accgacaagggccagcgctcgcacctgctgtacgaagtccgcgccaaggctcgcgaagcc
ttcgccgatgccgccccgcaggaccagatggcggccggcaagctcgtcaagaagctcgag
ggcgagatcgtccgcggtgcgatcctcaaggacggcacgcgcatcgacggtcgtaccacc
acgcagatccgtccgatcgaggcgatggtgcacttcctgccgcgcgcgcatggttcggca
ctgttcacgcgtggcgagacgcagtcgatctgcaccaccacgctcggcaccaaggacgcc
gagcagatgatcgacggcctgaccggcctgtcgtacgagaacttcatgctgcactacaac
ttcccgccctactcggtcggtgaagtcggtcgcttcggtgcgccgggccgtcgtgaagtc
ggccacggcaagctcgcctggcgcgcgctgcacccggtgctgccgtcgaaggacgagttc
ccgtacacgatccgcgttctgtcggacatcaccgagtcgaacggctcgtcgtcgatggcg
acggtctgcggcggttcgctgtcgatgatggacgccggtgtgccgctcaagcgcccggtc
tcgggcatcgcgatgggcctgatcctcgagggcaaggactttgcggttctctcggacatc
ctcggcgacgaggatcacctcggcgacatggacttcaaggtcgcagggaccgaggccggc
atcaccacgatgcagatggacatcaagatcgccggcatcaccgaagagatcatgcgtgtc
gctttggcccaggccaaggaaggccgcgcgcacatcctcggcgaaatggccaaggcgctc
gaccacacgcgtgaggaactctcggcgcacgccccgcgcatcgagaccttcacgatcgac
aagaccaagatccgtgacgtcatcggcacgggcggcaaggtcattcgcgagatcgtcgcg
acgaccggcgccaaggtcgacatcgacgacgagggcgtgatcaaggtgtcgtcgtccgac
accgcgcagatcgaagccgcgatcaagtggatcaagggcatcgtcgaggaagccgaagtc
ggcaaggtctatgacggcaaggtcgtcaacctggtggacttcggtgcgttcgtgaacttc
atgggtggcaaggacggcctcgtccatgtctcagaaatcaagaacgagcgcgtcgagaag
gtctcggatgttctttccgagggtcaagaagtgaaggtcaaggttctcgagatcgacccg
cgcggcaaggttcgcctgtcgatgcgcgtcgtcgaccaggagaccggtgccgagctcgaa
gatacgcgcccagcgcgtgagccgcgcgaaggcggcgaccgtggtccgcgtccgccgcgt
cgtgatggcgacggtggccgtggcccgggcggcggcgatcgtggtccgcgcggcggcggt
ggcggcggcgaaggccgtggcccgcgtcgtgacggcgacggtggccgtggtccgcgccgc
gatggcggcggtgcacgccccgagcgcgccgctggcggcaacgaggacggccctgcgccc
gagttcgccccggcgttcctgactggcgatcgcgactaa
DBGET
integrated database retrieval system
