Sphingomonas sp. AAP5: E2E30_14740
Help
Entry
E2E30_14740 CDS
T10507
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
saap Sphingomonas sp. AAP5
Pathway
saap00300
Lysine biosynthesis
saap00470
D-Amino acid metabolism
saap01100
Metabolic pathways
saap01110
Biosynthesis of secondary metabolites
saap01120
Microbial metabolism in diverse environments
saap01230
Biosynthesis of amino acids
Module
saap_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E2E30_14740 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E2E30_14740 (lysA)
Enzymes [BR:
saap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
E2E30_14740 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QBM76875
LinkDB
All DBs
Position
complement(3203696..3204958)
Genome browser
AA seq
420 aa
AA seq
DB search
MDHFSLVDGALHCEGVPLAAIAEVVGTPVYVYSTATFERHARVFREGLAPAGDVHLAYAI
KANPNLAVLRVLAREGYGADVVSGGELARALAAGIPAKDVVFSGVGKTVGELSTALDVGL
GQFNLELEEEGVVLAGLAAARGMRADATLRVNPDVDAGTHAKISTGKRENKFGVPIDQAP
AIFARLAGLPGLALRGVAIHIGSQLSELAPLEAAYARIGALVAELRAAGHPIERVDLGGG
LGVPYRAGEVFPSPAEYGAMVARVTKGWGVRLMFEPGRVIAGNAGVLLTKVIWVKPGAIN
PYVIVDAAMNDLARPAMYDAWHDFEAVSPSGARMTANIAGPVCESGDTFAMARDIDTVKS
GDLAIFRTAGAYGATMASTYNSRALVPEVLVDGDRFAVVADRILPETILAAERIPDWLKA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatcatttttcgctcgtcgacggcgcgctgcactgcgagggcgtgccgctcgcggcg
atcgccgaagtggtcggcacgcccgtctatgtctattcgaccgcgaccttcgagcgccat
gcgcgcgtgtttcgcgaagggctggcgccggcgggggatgtccacctcgcctacgcgatc
aaggccaaccccaaccttgccgtgctccgcgtgctcgcgcgcgaaggctatggcgccgat
gtcgtgtcgggcggcgagctggcgcgcgcgctggcggcgggaatcccggcgaaggacgtg
gtgttttcgggcgtcggcaagaccgtcggcgaattgtcgaccgcgctcgatgtcgggctc
ggccagttcaatctcgagcttgaagaggaaggcgtcgtgctcgccgggctcgccgccgcg
cgcgggatgcgcgcggatgcgacgctgcgcgtcaatcccgacgtcgatgccgggacgcat
gcgaagatctcgacgggcaagcgcgagaacaagttcggcgtgccgatcgaccaggcgccg
gcgatcttcgcgcggctcgccggtttgcccgggctcgcgctgcgcggcgtggcgatccat
atcgggagccagctgagcgagctcgccccgctcgaggcggcctatgcgcggatcggcgcg
ctcgtcgccgaattgcgcgcggcgggccatccgatcgagcgagtcgatctcggcggcggg
ctcggtgtgccgtaccgcgcgggcgaggtgttcccgagcccggccgaatatggcgcgatg
gtcgcgcgcgtcaccaaggggtggggcgtgcggctgatgttcgagcccggccgcgtgatc
gcgggcaatgccggcgtgctgctgaccaaggtgatctgggtcaagcccggcgcgatcaac
ccgtatgtcatcgtcgacgccgcgatgaacgatctcgcgcgcccggcgatgtacgatgcg
tggcacgatttcgaggcggtgtccccgagcggcgcgcggatgaccgccaatatcgccggc
ccggtgtgcgaaagcggcgacaccttcgcgatggcgcgcgacatcgacacggtgaagagc
ggcgatctcgcgatcttccgcaccgccggcgcgtacggcgcgacgatggcgtcgacgtat
aacagccgcgcgctggtgcctgaagtgctcgtcgatggcgatcgcttcgcggtcgtcgcc
gatcgaatcctgcccgagacgatccttgccgccgagcgcattccggactggttgaaggcg
tga
DBGET
integrated database retrieval system