Sphingomonas sp. AAP5: E2E30_15675
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Entry
E2E30_15675 CDS
T10507
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
saap Sphingomonas sp. AAP5
Pathway
saap03030
DNA replication
saap03410
Base excision repair
saap03420
Nucleotide excision repair
saap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2E30_15675 (polA)
03410 Base excision repair
E2E30_15675 (polA)
03420 Nucleotide excision repair
E2E30_15675 (polA)
03440 Homologous recombination
E2E30_15675 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saap03032
]
E2E30_15675 (polA)
03400 DNA repair and recombination proteins [BR:
saap03400
]
E2E30_15675 (polA)
Enzymes [BR:
saap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2E30_15675 (polA)
DNA replication proteins [BR:
saap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E2E30_15675 (polA)
DNA repair and recombination proteins [BR:
saap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E2E30_15675 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2E30_15675 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DprA_N
HHH
Motif
Other DBs
NCBI-ProteinID:
QBM77043
LinkDB
All DBs
Position
3386028..3388784
Genome browser
AA seq
918 aa
AA seq
DB search
MPHLYLVDGSGYIFRAYHRLPPLTNKHGEPVGAVYGYTTMLWKLADEVHAADGPTHMAVI
LDKSSKTFRNELYDQYKAQRPPPPEDLVPQFPMIRDATRAFSLPCIETEGLEADDIIACY
SRAALAQGWEVTIVSSDKDLMQLIEPGLDMYDTMNNRRLGAEHVAEKFHGITPAQLGDVL
ALMGDSVDNVPGVPGVGPKTAAKLILEHGDLEAVLAAAPGMKAGKLRDNLIEHAAMARLS
KELVTLKCDVALPEPLEDLELKGIPDAPLRAFLEHHGFRSLLAKLSAVADAPVPAPKSVP
TEQDPPCDHDGYETVVDEAALDSWIAAARHQGWIAIDTETTGIDATRAELVGVSMALQPN
KACYIPLAHGGSGLFAETPVQLDRDVALAKLKPLFEDPAVLKIGHNLKYDMIVLGRLGVG
VAPHDDTILMSFDLDAGLHGHSMDELAATHLSHSCIAFKDVVGVGKSQRSFNEVDLDAAT
RYAAEDADVTLRLWRRFKPRLVAESATRVYEMVDRPLAPVIAQMEMHGIKVDREKLSSLS
NDFAQQIGALEVEIHALAGGAFTIGSPKQLGDVLFERMGIKGGRKGKSGVYSTDVTELER
IAADKDSPGKDIATKVLEWRQLSKLKSTYTDALQAQINPATGRVHTSYSLTGAQTGRLSS
TDPNLQNIPIRTEIGRQIRDAFVAEPGNVLLAADYSQIELRLAAHMADVPALKAAFANGD
DIHSLTAMELFGEVNRDTRGRAKTINFAILYGISRWGLAGRLDVSADEAQAMIDRYFERF
PGIRNYIAATTEFVRETGYTATLFGRKTHFPRITSKLQHERQGAERAAINAPIQGTSADI
IKRAMVRMGPALEAAGLGHVRMLLQVHDELVFELPEGDVAAAKPVIEHVMASAAEPAIVL
SVPLGIEIGTGLSWGAAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatctctatcttgtcgatggctcgggatacattttccgcgcctatcaccgcctt
cccccgctcaccaacaagcatggcgagccggtcggcgcggtctatggctatacgacgatg
ctgtggaagctcgccgacgaagtccatgccgccgacggcccgacgcatatggcggtgatt
ctcgacaaatcgtcgaagaccttccgcaacgagctgtacgaccagtacaaggcgcagcgc
ccgccgccgcccgaagacctcgtgccccagtttccgatgatccgcgacgcgacgcgcgcc
ttctcgctgccgtgcatcgagaccgagggattggaggccgacgacatcatcgcctgctat
tcgcgcgccgcactcgcgcaagggtgggaagtgacgatcgtctcgtccgacaaggatctg
atgcagctgatcgagcccgggctcgacatgtacgacacgatgaacaaccggcgcctcggc
gccgagcatgtcgcggagaaattccacggcattaccccggcgcagctcggcgacgtgctc
gcgctgatgggcgacagcgtcgataacgtgccgggcgttcccggcgtcggccccaagacc
gctgccaagctgatcctcgagcatggcgatctcgaagcggtgctcgccgccgcgccgggg
atgaaggcaggcaagctgcgcgacaacctcatcgaacatgccgcgatggcgcgactgtcg
aaggagctcgtcacgctgaaatgcgacgtcgcgctccccgagccgctcgaggatctcgag
ctcaagggcattcccgacgcccctttgcgcgcgttcttggaacatcacggcttccgctcg
ctgctcgccaagctgtcggcagtcgccgatgcgccggtgcctgcgccgaaatcggtgccg
accgagcaggatccgccgtgcgaccatgacggctatgagaccgtggtcgacgaagccgca
ctcgacagctggatcgccgcggcgcgccaccagggctggatcgcgatcgataccgagacg
accgggatcgacgcgacgcgggccgaactggtcggggtgagcatggcgctccagcccaac
aaggcatgctacattccgctcgcgcatggcggatcggggctatttgctgagacgccagtg
cagctcgaccgcgatgtcgcgctcgccaagctgaaaccgctgttcgaggaccctgcggtg
ctcaagatcgggcataacctcaaatacgacatgatcgtgctcggacgcctcggcgtcggg
gttgcgccgcatgacgacacgatcctgatgagcttcgacctcgatgccggcctgcatggt
cacagcatggacgagctcgccgcgacgcatctctcgcacagctgcattgctttcaaggac
gtcgtcggcgtcggcaagtcgcagcgcagcttcaacgaagtcgatctcgatgcggcgaca
cgctacgccgccgaggatgccgacgtcacgttgcggttgtggcggcgcttcaagccgcgg
ctcgtcgccgagagcgcgacgcgcgtctacgagatggtcgatcgcccgctcgcgcccgtt
atcgcgcagatggagatgcacggcatcaaggtcgatcgcgaaaagctcagcagcctgtcg
aacgatttcgcgcagcagatcggcgcgctcgaagtcgagatccacgcgctcgccggcggc
gccttcacgatcggcagccccaagcaattgggcgacgtgctgttcgagcggatgggaata
aagggcgggcgcaagggcaagtcgggagtctattcgaccgacgtcaccgagctcgagcgg
atcgccgccgacaaggattcgcccggcaaggacatcgcgacgaaggtgctcgagtggcgc
cagctgtcgaagctcaaatcgacctataccgacgcgctccaggcgcagatcaaccccgcg
accgggcgcgtccacacgtcctattcgctgaccggcgcgcagaccgggcggttgtcctcg
accgacccgaatcttcagaacatcccgatccgcaccgagatcggccgccagatccgcgac
gcgttcgtcgccgagccgggcaacgtcctgctcgccgccgactattcgcagatcgagctg
cggctcgccgcgcacatggccgacgtgcctgcgctgaaggccgccttcgccaatggcgac
gacatccacagcctcaccgcgatggagttgttcggcgaggtcaatcgcgacacgcgcggg
cgggcgaagacgatcaacttcgcgatcctctacggcatcagtcgctgggggctggcgggg
cggctcgacgtgagcgcggacgaagcgcaggcgatgatcgatcgctatttcgagcgcttc
ccgggcatccgcaactatatcgcggcgaccaccgagttcgtccgcgagacgggctacaca
gcgacgctgttcgggcggaagacgcacttcccgcggatcacgtcgaagctccagcacgaa
cgccagggtgccgagcgcgccgcgatcaacgcgccgatccagggcacttcggccgatatc
atcaagcgtgcgatggtgcggatggggcccgcgctcgaagccgccgggctcgggcatgtg
cggatgctgctgcaggtccacgacgaactcgtgttcgaattgcccgagggcgatgtcgcc
gcggccaagcccgtgatcgagcatgtcatggcgagcgctgccgaaccggcaatcgtgctc
agcgtgccgctcggcatcgagatcggcacaggcctgagctggggcgcggcgcattga
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