Sphingomonas sp. AAP5: E2E30_15885
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Entry
E2E30_15885 CDS
T10507
Name
(GenBank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
saap Sphingomonas sp. AAP5
Pathway
saap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E2E30_15885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saap03400
]
E2E30_15885
DNA repair and recombination proteins [BR:
saap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E2E30_15885
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QBM77084
UniProt:
A0A4P6X9N7
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Position
complement(3434353..3435090)
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AA seq
245 aa
AA seq
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MPPPPPQIIRVIDLETTGEAPPLHGVCEIGWQDVALGKDGRWEIQGEGGSRLVNPGRPIP
PLTQAIHHILDEQVADAPFWHDVARGVLDPYPRRIALAAHRSAAEEKFCTPALTRDAPWI
CTWKCALRLWPDTPSFSNQMLRYWRKPEGLEHERGLPAHRAFPDAYVTAFHLRDMLNTVG
PEQLIAWSSVPGLLPRVIRPGPDRGKDWAELSDDSLAIMLGDRDEDVRFTAETELARRSG
NGSRD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccccgcccccccagatcatccgcgtcatcgacctcgagaccacaggtgaagcc
ccaccgctccacggcgtatgcgaaatcggctggcaggacgtcgcgctcggcaaggacggc
cgctgggagatccagggcgagggcggatcgcggctggtcaatcccggccgaccgatcccg
ccgctgacgcaggcgatccaccatatcctcgacgagcaggtcgccgacgcgccgttctgg
cacgatgtcgcgcgcggcgtgctcgatccctatccgcggcgcatcgcgctcgccgcgcac
cgctcggcggcggaggagaaattctgcacgccggcgctaacccgcgacgcgccgtggatc
tgcacgtggaaatgtgcgctgcggctgtggcccgacacgccgagcttttccaaccagatg
ctgcgctactggcgcaagcccgagggtctcgagcatgagcgcggcttgcccgcgcatcgc
gcctttcccgatgcctatgtcaccgccttccatttgcgcgacatgctcaacacggtcggg
cccgagcagttgatcgcctggtcgagcgtccccgggctgttaccgcgcgtcattcgtcca
ggccccgatcgcgggaaggactgggccgagctcagcgacgattcgctcgcgatcatgctg
ggcgaccgcgacgaggatgtgcggttcaccgccgagaccgaactggcccggcgcagcggc
aacggttcgcgcgactga
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