Sphingomonas sp. AAP5: E2E30_17600
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Entry
E2E30_17600 CDS
T10507
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
saap Sphingomonas sp. AAP5
Pathway
saap00300
Lysine biosynthesis
saap00470
D-Amino acid metabolism
saap01100
Metabolic pathways
saap01110
Biosynthesis of secondary metabolites
saap01120
Microbial metabolism in diverse environments
saap01230
Biosynthesis of amino acids
Module
saap_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E2E30_17600 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E2E30_17600 (dapF)
Enzymes [BR:
saap01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
E2E30_17600 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QBM77379
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Position
3789222..3790166
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AA seq
314 aa
AA seq
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MQIDFLKCHGSGNDFPLIDARDLALSEDDWARVAVALADRGGSVGGDGILLLTAGDATHD
FGMRMFNSDGSEAETCLNGLRCVARAGFEALGIDEARVRLKTSDAHVSRDPDLAAGVVTI
REVAGPVDLDVSHWPMHVGVKRIVEAPIAPLGSERVFTAVAIPNPHLVCFVETIDEAELV
ALGTQCEAAPDWLPNRANVSFVEVRGANLLFVRTFERGVGLTDSCGSAMAASTYAACLTR
RCGFGTEITVHNRGGLVRAEAREDGMVRLSGNATVEWRGSVDIHLATRTAGPVTVTTRHD
DEVAAWRGVVDAIV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgactttctcaaatgccacggttcgggcaatgatttcccgctgatcgacgcg
cgcgacctcgcgctgtccgaagacgattgggcacgcgtcgcggtcgcgctcgcggatcgc
ggcgggagtgtggggggcgacgggattctgctgctcaccgcgggcgatgcgacgcacgat
ttcgggatgcggatgttcaattcggacgggagcgaggccgagacgtgcctcaacggcttg
cgctgcgtcgcgcgcgccggtttcgaggcattggggatcgatgaggcgcgggtgcggctc
aagacgtccgacgcgcacgtctcgcgcgatcccgatcttgccgcgggcgtggtgacgatc
cgcgaggtggccggcccggtcgatctcgacgtgtcgcactggccgatgcacgtcggcgtc
aagcggatcgtcgaggcgccgatcgcgccgctcggcagcgagcgcgtgtttaccgcagtg
gcgattcccaacccgcatctcgtctgcttcgtcgagacgatcgacgaggccgaactcgtc
gcgctcggcacgcagtgcgaggcggcgcccgactggttgcccaaccgcgccaacgtctcg
ttcgtcgaagtgcgcggcgccaatctgctgttcgtgcggaccttcgagcgcggcgtcggc
ctcaccgacagttgcggcagcgcgatggcggcatcgacctatgccgcgtgcctgacgcgg
cgctgcggcttcggcaccgagatcacggtgcacaatcgcggcgggctggtccgtgccgag
gcgcgcgaggacgggatggtgcgcctctcgggcaatgcgacggtcgaatggcgcggttcg
gtcgatattcatctcgcgacgcgcacagccgggcccgtcaccgtgacgacgcgccatgac
gatgaagtcgcggcgtggcgcggggtggtcgacgcgatcgtctga
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