Sphingomonas sp. AAP5: E2E30_19190
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Entry
E2E30_19190 CDS
T10507
Name
(GenBank) conjugative relaxase
Organism
saap Sphingomonas sp. AAP5
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Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Viral_helicase1
ABC_tran
AAA_16
AAA_11
AAA_22
RsgA_GTPase
NTPase_1
NPHP3_N
AAA_29
CbiA
NACHT
SRP54
Motif
Other DBs
NCBI-ProteinID:
QBM78002
UniProt:
A0A4P6XF97
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All DBs
Position
p213:102893..106018
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AA seq
1041 aa
AA seq
DB search
MLSVASVKSASGAASYFAKDDYYTAEHSSEATLWGGIGAAEIGLKGEVTKEAFEKILNGE
MPSGEKVGQVPNRQHGVDLTFSMPKSASILAYVTGDTRILAAHMNAVKTTMAWVEKTFAE
GRTYDRSKAGDAVRTGNLVYAMFQHDTSRALDPQGHIHVLVANMTKMANGVWQALHNGQL
WKNNTTIGSAYHANYRAELAKIGFETSVSGKHGQFEINGVPKKVIEAYSQRSTDIRAKAA
ELGITNPKQIDRITTNTRDAKLNVEDRDALRAAWRDRAAEMGFDGRALVEAAKARASGNA
IDSKPGTMERIRETIAGIRETLGDAFRPNDPLIVSGLERLRISPVDLRAQHAVASAIRIH
AQREAAFSIPDVVKTALDRGLKGVTPDHVDRRVSELIRAEQLIPGKQDRIDGVVTHVTTP
EALATERGILAEIERGKGQGRVIVSPETVIARLHAASGDKELNAGQMAAATMALTSSDRI
VAVQGVSGAGKSTMLASVSRNVEQEGGKVVGLALMKATSDRLGAEAGIESRTVSSFVHSY
ARHALAGKGADYDGARNELAGTTIILDEASMVGSDQMKHLVGIANALGVDRYLMIGDRQQ
ITAVDAGKAFALAQAGGITMARMDENLRQRTEQLRTVAALTNRGAAREAMAMLGNKVTAN
PEHVKAASEHWLGLTPEQRASTAMFSSGRVARAELNVRIQEGLAAEGTLKGEGVEIGVLD
KVNLTREELRYPQAYEAKGDARLVIDLRFAIRELGLPRGTFDVIGVNAKGHVQVQIGNKV
KTFDPQKISPLDKTDAMQLAQREEIKLHEGDKIRWTTNDKDRGLNNNDIARVLSADPSGI
KVEASDGRIHELKPGDPMMERISLAYALNMHAAQGITADNAIAVMSYKESNLSNQRLFNV
TVTRVRDDIQLFTDNREKLTQAIERNEGNKTSALETTGELSIDPARSSLPENGAASGLGG
SPSGLGSSGSFNPTLPPDLDRGPEKLVGDKADMITLAAMSTGPTAPDFKNDPTLSAASLR
IGAEPPAIELPFPEKDIGLEL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgtcgcctccgtcaagtcggcttccggcgcagcgagctacttcgccaaggac
gactattacaccgccgagcactcctccgaggcgaccctctggggcggcattggggctgca
gagatcggcctcaagggggaggtcaccaaggaggcgttcgagaagatcctcaacggtgag
atgccatcgggcgagaaggtcggccaggtgccgaaccggcagcacggcgtcgacctgaca
ttctcgatgccgaaatccgcgagcatcctcgcctacgtcactggcgacacccgcatcctc
gcagctcatatgaacgccgttaagacgacaatggcgtgggtcgaaaagacgttcgccgaa
gggcgcacatacgaccgctcaaaagcgggtgacgcagtccgcaccggcaacctcgtctac
gccatgttccagcacgacacgagccgtgcgctcgacccgcaggggcacatccacgtcctc
gtcgccaacatgaccaagatggccaacggggtctggcaagcgctgcacaacggtcagcta
tggaagaacaacaccacgatcggttcggcctatcacgccaattaccgcgccgagctggcg
aagatcggctttgagacgtcggtttccggcaaacatggccagttcgaaatcaacggcgtg
cccaaaaaggtcatcgaggcctacagccagcgcagcaccgacataagggcgaaggctgct
gagcttggcataaccaaccccaagcagatcgatcggatcaccacaaacacccgcgatgcg
aagctcaacgtcgaggatcgcgacgctctccgtgcagcgtggcgcgaccgtgcggcggag
atggggttcgacggccgggccctggtcgaagccgcgaaagcacgagcgagcggtaatgcg
atagacagcaaaccaggcaccatggagcgcatccgcgagaccatcgccggcatccgtgag
acgcttggggacgctttccgcccgaacgatccgctgattgtcagcggcctcgagcgtctg
cggatctctccggtcgacctacgagcccagcacgctgtcgcctccgccatccggatccac
gcgcagcgcgaagcggcgttctcgatccccgacgtcgtgaagacggctctcgatcgcggc
ctgaaaggcgtcacacccgaccatgtcgaccggcgcgtgtccgagctcatccgcgccgag
caactgatccctggtaagcaggaccgcatcgatggcgtcgtcacccacgtcaccacgccg
gaggcgctcgcaaccgagcggggcatcctagctgagatcgagcggggcaagggacagggg
cgcgtcatcgtctcgccggagacggtgatcgctcggctccatgccgcttccggcgacaag
gaactgaacgctggccagatggcggccgcaacgatggcactcacgtcctccgaccgcatc
gtcgccgtccagggcgtgtcgggcgccggcaagtccacgatgctcgcgagcgtctcgcgc
aacgtcgaacaggaagggggcaaggtcgtcggcttggcgctgatgaaggccacctccgac
cggcttggcgcggaggccggcatcgagagccgcaccgtctcttccttcgtccacagctac
gcccgtcatgcgctggcaggaaagggtgccgactatgacggcgcccgcaacgagctggcc
ggcaccaccatcatcctcgacgaggcgtccatggtcggatcggaccagatgaagcacctg
gtcgggatcgccaacgcgcttggggtcgatcgatacctgatgattggcgatcgccagcag
atcacggcggtcgacgccggcaaggccttcgcactcgcgcaggcgggcgggatcacgatg
gcgcgcatggatgagaacctgcgccaacgaaccgagcagctgcggaccgttgctgcgctc
accaatcgcggcgcggctcgcgaagccatggcgatgctcggcaacaaggtgactgccaat
cccgagcacgtgaaagcggcatccgaacactggctaggcctcacgcccgagcagcgggcc
tcaacagcgatgttctcgtcggggcgggtggcccgtgccgagctcaacgtccgcatacag
gaaggtctcgctgccgaagggacgctgaagggtgagggagtggaaattggcgtcctcgat
aaggtcaacctgacccgggaagaactccgctacccccaggcttacgaggcgaagggcgat
gcacggctcgtcatcgatctgcggtttgcgatccgcgagcttggcctgccgcggggcacc
tttgacgtgatcggggtcaatgccaaagggcatgtccaagtccagatcggcaacaaggtc
aaaaccttcgacccgcagaagatctcgcctctcgacaagaccgatgcgatgcaactcgcc
cagagggaggaaatcaagctccacgaaggcgacaagatccgctggacgacgaacgacaag
gatcgcggtctcaacaacaacgacatcgcgcgcgtgctgtcggccgatccgtcagggatc
aaggtggaggcgagcgacgggcgcatccatgagctgaagcccggcgaccctatgatggag
cgcatcagcctcgcctacgcgctcaacatgcacgccgctcagggcatcaccgccgacaat
gcgatcgccgtaatgagctacaaggagtccaacctctccaatcagcggctcttcaacgtc
acggtcacacgcgtccgtgacgatatccagctgtttaccgacaatcgcgagaagctgacc
caggcgatcgagcgcaacgagggtaacaagacctccgcgctcgaaaccaccggcgagttg
tcgatcgacccagcgcgaagctcgctgccggagaacggagcggcgtcgggtctaggcggc
agcccgagcggcttgggctcctccggctcattcaacccgaccctgcctcccgatctcgat
cgaggacccgagaagctggtcggcgacaaggcggatatgatcacgctggccgcgatgagc
acaggcccgacagcgcctgacttcaagaacgatcccaccctctcggccgcatcgctgcgg
atcggtgccgagccgcccgcgatcgagctgcccttccccgagaaagacatcggactggag
ctatga
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