Sphingomonas sp. AAP5: E2E30_19395
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Entry
E2E30_19395 CDS
T10507
Name
(GenBank) transposase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
saap Sphingomonas sp. AAP5
Pathway
saap03030
DNA replication
saap03430
Mismatch repair
saap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2E30_19395
03430 Mismatch repair
E2E30_19395
03440 Homologous recombination
E2E30_19395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saap03032
]
E2E30_19395
03400 DNA repair and recombination proteins [BR:
saap03400
]
E2E30_19395
Enzymes [BR:
saap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2E30_19395
DNA replication proteins [BR:
saap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2E30_19395
DNA repair and recombination proteins [BR:
saap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2E30_19395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QBM78107
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All DBs
Position
p213:complement(146771..147652)
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AA seq
293 aa
AA seq
DB search
MDSLTIQKPAPLTADTAAPDFVVVDVETACSRVSSICQIGIVGFKDGVEMFEYETLVDPP
DRFSSFNTRIHGITGDHVLGAPTFGDIHAAIDGHLTGRVTVAHSFFDKGALGAACAVHER
RVIETTWLDSVRVAKRAWPELSSHRLNVVTKFLGVRHKHHDALSDARAAGMVIVRAIEHT
GIGLAGWLSPASGRRGPAPKAAETGPLKGERVAILGAARDGALARCLAAAGARIMASVGT
TTTKLVISDEQPFGRFVTAHADHRRAEELRQGGVPIEIVTEGELRRQLKLPLG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggattccctgaccattcagaaaccggcaccgctcacggcggacacggctgcacccgac
ttcgtcgtcgtcgacgtggagaccgcctgctcgcgcgtcagcagcatctgccagatcggc
atcgtcggcttcaaggacggggtcgagatgttcgagtacgagacgctggtcgatccgccc
gaccgcttctcgtcgttcaacacccgcatccacgggatcaccggtgaccacgtcctcggc
gcgccgacgttcggcgatattcatgccgctatcgacgggcacctgacaggccgcgtcacc
gtcgcgcactccttctttgacaaaggtgcgctcggcgcggcgtgcgcggtccacgagcga
agggtcatcgagacgacgtggctcgacagcgtccgtgtggcaaagcgcgcctggcccgag
ctctccagtcacaggctgaacgttgtgacgaagttcctcggcgtgcgacacaagcatcat
gacgcgcttagcgatgcgcgtgctgccggcatggtgatcgtccgtgccatcgaacacacc
ggcatcgggctcgccgggtggctgtcgccggccagcgggcgccgcggtccggcacccaaa
gcggcggagacgggtccgctgaagggtgagcgcgtagcgatcctcggtgcagcgcgcgac
ggtgcgcttgcgcgctgcctcgcggcagccggcgcgcgcatcatggcatcggtcggcacg
accacgaccaagctcgtcatcagtgacgagcagccctttggtcgctttgtcaccgcgcac
gcggaccatcgccgtgccgaagagcttcggcagggcggagtaccgatcgagatcgtcact
gagggggaactccgtcgccagctcaagctacccctggggtga
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