KEGG   Sphingomonas sp. AAP5: E2E30_20135
Entry
E2E30_20135       CDS       T10507                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
saap  Sphingomonas sp. AAP5
Brite
KEGG Orthology (KO) [BR:saap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:saap03032]
    E2E30_20135
   03036 Chromosome and associated proteins [BR:saap03036]
    E2E30_20135
   03400 DNA repair and recombination proteins [BR:saap03400]
    E2E30_20135
DNA replication proteins [BR:saap03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    E2E30_20135
Chromosome and associated proteins [BR:saap03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    E2E30_20135
DNA repair and recombination proteins [BR:saap03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      E2E30_20135
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: QBM78184
UniProt: A0A4P6XCD3
LinkDB
Position
p150:complement(82056..82325)
AA seq 89 aa
MNIGELAKGVAGTTGTSEAEAKAATAAVFDQIASAAAKGEEVSIAGFGKFSVKDRPERQG
RNPSTGEAITIAASKKVSFTPAKGLKDKL
NT seq 270 nt   +upstreamnt  +downstreamnt
atgaacatcggtgaactggcgaagggcgtcgctgggacgacaggcacgagcgaggccgag
gccaaggccgcaaccgccgccgtgttcgaccagatcgcaagcgcggccgcaaaaggcgaa
gaagtctcgatcgccggcttcggcaagttctcggtcaaggatcgtcctgagcgccagggc
cgcaatccgtcgaccggcgaggcgataacgatcgctgcatcgaagaaggtctcgttcaca
cccgccaagggtctgaaggacaagctctaa

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