Staphylococcus aureus RF122: SAB0093
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Entry
SAB0093 CDS
T00303
Symbol
capD
Name
(GenBank) capsular polysaccharide synthesis enzyme CapD
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
sab
Staphylococcus aureus RF122
Pathway
sab00541
Biosynthesis of various nucleotide sugars
sab00552
Teichoic acid biosynthesis
sab01100
Metabolic pathways
sab01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SAB0093 (capD)
00552 Teichoic acid biosynthesis
SAB0093 (capD)
Enzymes [BR:
sab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SAB0093 (capD)
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_10
NAD_binding_4
KR
adh_short
GFO_IDH_MocA
TrkA_N
Tmemb_170
DUF3842
wHTH_TTC3
Motif
Other DBs
NCBI-ProteinID:
CAI79781
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Position
114510..116333
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AA seq
607 aa
AA seq
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MAHLSVKLRLLILALIDSLIVTFSVFVSYYILEPYFKTYSVKLLILAAISLFISHHISAF
IFNMYHRAWEYASVSELILIVKAVTTSIVITMVVVTIVTGNRPFFRLYLITWMMHLILIG
GSRLFWRIYRKYLGGKSFNKKPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKR
NITITEGVKVQGKIADIPELVRKYKIKKIIIAIPTIGQERLKEINNICHMDGVELLKMPN
IEDVMSGELEVNQLKKVEVEDLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQ
VCNFYPERIILLGHGENSIYLINRELRNRFGKNVDIVPIIADVQNSARMFEIMEMYKPYA
VYHAAAHKHVPLMEDNPEEAVCNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGA
SKRIAEMIIQSLNDETHRTNFVVVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRY
FMTIPEASRLVLQAGALAEGGEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIR
PGEKMFEELMNKDEVHPEQVFEKIYRGKVQHMKCNEVEAIIQDIVNDFSKEKIINYANGK
KGDNYVR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcacatttatctgtgaaattgcggcttttaatactagcattaatcgattcactgata
gtgacattttcagtattcgtaagttattacattttagaaccgtatttcaaaacatattct
gtcaaattattaatattggcagctatatcactattcatatcgcatcatatttcagcattt
atttttaatatgtatcatcgagcgtgggaatatgccagtgtgagtgaattgattttaatt
gttaaagctgtgacgacatctatcgttattacgatggtggtcgtgacaattgttacaggc
aatagaccgttttttagattgtatttaattacttggatgatgcacttgattttaataggt
ggctcaaggttattttggcgtatttatcggaaataccttggaggtaagtcatttaataag
aagccaactttagttgttggtgctggccaagcaggttcaatgttgattagacaaatgttg
aaaagtgacgaaatgaaacttgaaccggtattagcagtcgatgatgacgaacataaacgc
aatatcacaattactgagggtgtaaaagtccaaggtaaaattgcggatattccagaacta
gtgaggaaatataagattaaaaaaatcatcattgcaattccaactattggtcaagagcgc
ttgaaagaaattaataatatttgccatatggatggcgttgagttattgaaaatgccaaat
atagaagacgtcatgtctggtgagttagaagtgaaccaactgaaaaaagttgaagtagaa
gatttactaggcagagatcctgttgaattagatatggatatgatatcaaatgaattgacg
aataaaactattttagttacgggtgcaggtggttcaataggatcagaaatttgtagacaa
gtttgtaatttctatccagaacgtattattctacttggccatggtgaaaacagtatttat
ttaatcaatcgtgaattgcgaaatcgcttcggaaaaaatgttgatatcgttcctattata
gcggatgtgcaaaatagcgcgcgtatgtttgaaattatggaaatgtataaaccatacgca
gtttatcatgcagcagcacacaagcacgtaccgttaatggaagacaatcctgaagaagca
gtatgtaataatattttaggtacgaaaaatactgctgaagctgctaaaaatgcagaggta
aagaaattcgttatgatttctacggataaagccgttaatccgcctaatgtcatgggagct
tcaaagcgaattgcagaaatgattattcaaagtttaaatgatgaaacgcatcgaacaaat
tttgttgtagtgagatttggtaatgtacttggatcgagaggatctgtgattccacttttc
aaaagtcaaattgaagaaggtgggccagttactgtgacacatcctgaaatgacacgttac
tttatgacaattcctgaagcttctagactagttttgcaggcaggggcattagcagaaggt
ggcgaagtatttgtgctagatatgggagaaccagtgaaaattgtagatttggcacgtaat
ttaattaagctaagtggtaaaaaagaagacgacatacgcattacttatacagggattaga
cccggcgaaaaaatgtttgaagagcttatgaataaagatgaggttcatcctgaacaagta
tttgaaaaaatatatcgtggcaaagtacaacatatgaaatgtaatgaagttgaagcgatt
attcaagacatcgtcaatgactttagtaaagaaaaaattattaactatgccaatggcaaa
aagggagataattatgttcgatga
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