Staphylococcus aureus RF122: SAB1133
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Entry
SAB1133 CDS
T00303
Symbol
truB
Name
(GenBank) tRNA-pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sab
Staphylococcus aureus RF122
Brite
KEGG Orthology (KO) [BR:
sab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sab03016
]
SAB1133 (truB)
Enzymes [BR:
sab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SAB1133 (truB)
Transfer RNA biogenesis [BR:
sab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAB1133 (truB)
Prokaryotic type
SAB1133 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Serine_rich
Motif
Other DBs
NCBI-ProteinID:
CAI80822
UniProt:
Q2YXP5
LinkDB
All DBs
Position
1228807..1229724
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AA seq
305 aa
AA seq
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MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYV
MDMGKAYEANVSIGRSTTTEDQTGDTLEMKGVHSADFNNDDIDRLLENFKGVIEQIPPMY
SSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDFKENECHFKIRVICGKGTYIR
TLATDIGVKLGFPAHMSKLTRIESGGFVLKDSLTLEQIKELHEQDSLQNKLFPLEYGLKG
LPSIKIKDSHIKKRILNGQKFNKNEFDNKIKDQIVFIDDDSEKVLAIYMVHPTKESEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggtatattaccagtatataaagaacgtggtttaacaagtcatgacgtcgta
ttcaaattgcgtaaaattttaaagactaaaaaaatagggcacactggtacgcttgatcct
gaagttgcaggcgtgttaccggtatgtataggtaatgcaacgagagttagtgattatgtt
atggatatgggcaaagcttatgaagcaaatgtatcgataggaagaagcacaacgactgaa
gatcaaacgggtgatacattggaaatgaagggtgtacattcagctgatttcaacaatgac
gatattgaccgcttgttagaaaattttaaaggtgttattgaacaaattccgccaatgtat
tcatcagtcaaggtgaatggtaaaaaattatatgaatatgcgcgtaataatgaaacagtt
gaaagaccaaagcgtaaagttaatattaaagacattgggcgtatatctgaattagatttt
aaagaaaatgagtgtcattttaaaatacgcgtcatctgtggtaaaggtacatatattaga
acgctagcaactgatattggtgtgaaattaggttttccggcacatatgtcgaaattaacg
cgaatcgagtctggtggatttgtgttgaaagatagccttacattagaacaaataaaagaa
cttcatgagcaggattcattgcaaaataaattgtttcctttagaatatggattaaagggt
ttgccaagcattaaaattaaagattcgcacataaaaaaacgtattttaaatgggcagaaa
tttaataaaaatgaatttgataacaaaattaaagaccaaattgtatttattgatgatgat
tcagaaaaagtattagcaatttatatggtacaccctacaaaagaatcagaaattaaacct
aaaaaagtctttaattaa
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