Staphylococcus aureus RF122: SAB1505c
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Entry
SAB1505c CDS
T00303
Name
(GenBank) single-strand DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sab
Staphylococcus aureus RF122
Pathway
sab03410
Base excision repair
sab03430
Mismatch repair
sab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAB1505c
03430 Mismatch repair
SAB1505c
03440 Homologous recombination
SAB1505c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sab03400
]
SAB1505c
DNA repair and recombination proteins [BR:
sab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SAB1505c
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAB1505c
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAB1505c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CAI81194
LinkDB
All DBs
Position
complement(1623331..1625604)
Genome browser
AA seq
757 aa
AA seq
DB search
MIKPKYKWKLIKPTEYISDELTSKLKLTPIVKKILESKSIIDEQAIESIISDTDINHDAL
QLSDMTKTIERIKRAIANDEKILVYGDYDADGVTSTTILVTTLQLLGAQVGWHIPNRFTE
GYGPNELAFRNAHDEGITLIITVDNGIQGHNEIKMVQDLGVDVIVTDHHEIGSTLPEAYA
IVHPMHPSFNYPFQQLCGAGVAYKLAQALIENVPDYFKALVAIGTIADLVSLTDENRSLV
KQGLKVLNDQCPTSVKALLKEAGYNDNIDEETIGFIIGPRLNAVGRLDDASLACELLMTD
DEEEAAFLAEQVEHFNRERKDIVATITEEAMAMAETKVKNGDLFLLLAKENWHEGVLGIV
ASKIVETFALPTLILNIDREQNHAKGSARSIDQVSMFEILSAHQELIAKFGGHHMAAGMT
MDIENIESLAEGLNKWMKELSKTTSLDPVKPVDVLLTENDITIKNIRDMNRLRPFGTDFS
RPIFEMDDLSVSSVKAIGQQKNHLKLTLGESNIAALFWQNGHLEPELQDEQPINILGSVQ
INEWNGNQSPQLIIQDIAMNEQQILDYRSKRKSLPFTENDENIVVLIHPKSDKVNANEYY
YGEEIKQQTDKVVLRDLPTSMEDLSNSLQQLQFSQLYIVLQHNHSIYFDGIPNMDVFKKC
YKALITKQETNIQKEGMLLCQHLSVKPDTLKFMLKVFLDLNFVTQEDGLIRINQQPDKRS
IDSSKVYQLRQQRMDVEKQLLYQDFSEIKNWIKSQLS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaccgaagtataagtggaaattaattaaaccaactgaatacataagtgatgaa
ttaacatcaaaattaaagttaacgccaatcgtaaaaaaaatattagaaagtaaatcgatt
attgatgaacaagcaattgaatccatcatttcagatacagatatcaatcatgatgcattg
caattgagcgatatgacaaagactattgaaagaattaaaagagcgatagcgaatgatgag
aaaatcctagtttatggtgattacgatgccgacggtgttacctcaactacaattttagtg
acaacattacaacttttaggtgcacaagtaggatggcatattcctaaccgctttacggaa
ggatatggaccaaacgaactagcatttagaaatgctcatgatgaaggcataacattaatc
ataactgttgataatggcatacaaggacataatgaaattaaaatggttcaagatttagga
gttgatgtcattgtaactgatcatcatgaaattggtagtacattaccagaagcatatgca
atcgtacatccaatgcatccatcgtttaattatccgttccaacaattgtgtggtgcaggt
gttgcgtacaaattagcacaagcattgattgaaaatgtacctgattattttaaagcatta
gttgcgataggtaccattgcggatttagtatccttaactgatgaaaatcgatcattagtg
aaacaaggattaaaagtcttaaatgatcaatgtccgacctctgttaaagcattgttaaaa
gaagcgggatacaatgacaatattgatgaagaaacaattggttttattattggacctaga
cttaatgctgtaggtcgtttagatgacgcatcattagcttgcgaattgttgatgactgac
gacgaagaagaagctgcatttttagcagaacaagttgaacattttaaccgtgaaagaaaa
gatattgtggcaactatcacagaagaagcaatggctatggcagaaacgaaagttaaaaat
ggagatttatttttacttttagcaaaagaaaattggcatgaaggtgtcttaggtattgta
gcttcgaaaattgttgaaacatttgctttgccaacattaattttaaatattgatagggag
caaaatcatgcaaaaggttccgccagatcaattgatcaagtgtcgatgtttgaaatacta
tcagcacaccaagagttaatcgctaaatttggcggccatcatatggctgcaggtatgacg
atggatattgaaaatatagaatcgttagctgaaggtttaaataaatggatgaaagaatta
tctaaaacaacttcgttagatcccgtaaagccggtagatgtattattaacagaaaatgat
ataacgattaaaaatattcgtgatatgaatcgtttaagacccttcggaacagatttttct
agacctatttttgaaatggatgatttatcagtttcttcagttaaggcgataggtcaacaa
aaaaatcatctaaaattgacgcttggtgaaagtaatatcgccgcactattttggcaaaat
ggacacttagaacctgagttgcaagatgaacagccaattaatatattaggatctgttcaa
atcaacgaatggaatggtaatcaatcaccgcaattaattattcaagatattgcgatgaac
gaacagcaaatattagattatagaagtaagcgaaaaagtttaccttttacagaaaatgat
gaaaatattgtcgtgcttattcatcctaaaagtgataaagtaaatgcgaatgaatattat
tatggtgaagaaattaaacaacaaactgataaagtagtattaagagatttacctacgtcg
atggaagatttgtctaattccctgcaacaactgcaattttctcaactttatatagttttg
caacataatcattcgatttacttcgatggtatacctaatatggatgtttttaaaaagtgt
tataaagcattaataactaaacaagaaacaaatatccagaaagagggtatgttattgtgt
caacatttaagtgtgaaaccagatacacttaaattcatgttgaaagttttcttagactta
aattttgtaacacaagaagatggtttaattcgaatcaatcaacaacctgataaaagatcg
attgattccagcaaagtgtatcaattaagacaacaacgtatggatgttgaaaagcaatta
ttatatcaagatttttcagaaataaaaaattggataaagtcacaattgtcgtga
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