Streptomyces albidocamelliae: N8I86_32270
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Entry
N8I86_32270 CDS
T10602
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sabd Streptomyces albidocamelliae
Pathway
sabd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sabd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N8I86_32270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sabd03400
]
N8I86_32270
Enzymes [BR:
sabd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
N8I86_32270
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
N8I86_32270
DNA repair and recombination proteins [BR:
sabd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N8I86_32270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_RRN7
Zn_ribbon_8
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
UXY38989
LinkDB
All DBs
Position
7136096..7136959
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AA seq
287 aa
AA seq
DB search
MPELPEVEALTDFLTEHLVGRRVVRVLPVAISVLKTYDPPVTALEGAEVTAVRRYGKFLD
LETDGGLHLVTHLARAGWLQWKDRLPDGPPKPGKGPLALRVALETGEGFDLTEAGTQKRL
AVYVVRDPGEVPGVARLGPDPLADDFDEARFAALLKDERRQLKGALRDQSLIAGVGNAYS
DEILHAAKMSPFKLAASLTPDETHHLYEALRTTLTEAVERSRGVAAGRLKAEKKSGLRVH
GRTGEPCPVCGDTIREVSFSDSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggtagaagcgctgacggacttcctcaccgagcacctggtcggc
cgccgggtggtgcgggtgctgcccgtcgccatcagcgtcctgaagacgtacgacccgccg
gtcaccgccctggagggcgccgaggtgacggccgtgcgccggtacggcaagttcctcgac
ctggagacggacggcgggctgcatctggtcacccacctcgcccgcgcgggctggctgcag
tggaaggaccggctgcccgacggtccgcccaagccgggcaagggacccctcgcgctccgc
gtggcgctggagaccggcgagggcttcgacctcaccgaggcaggcacccagaaacgcctc
gcggtgtacgtcgtccgtgacccgggggaggtcccgggtgtcgcccggctcggcccggac
ccgctcgccgacgacttcgacgaggcccgcttcgccgccctcctgaaggacgagcgacgg
cagctcaagggggcgctgcgggaccagtccctgatcgccggcgtcggcaacgcctacagc
gacgagatcctgcacgccgcgaagatgtcgccgttcaagctggcggcctcgctcaccccg
gacgagacccaccacctctacgaggcgctgcgcaccacgctcaccgaggcggtcgaacgc
tcccgcggagtggccgccgggcgcctgaaggccgagaagaagagcggtctgcgggtgcac
ggccgcaccggcgagccctgcccggtctgcggggacaccatccgcgaggtctccttcagc
gattcctcgctgcagtactgccccacctgccagacgggcggcaaacccctggcggaccgc
cgcctctcccgcctgctgaagtga
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