Streptomyces albidocamelliae: N8I86_35415
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Entry
N8I86_35415 CDS
T10602
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sabd Streptomyces albidocamelliae
Pathway
sabd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sabd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N8I86_35415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sabd03019
]
N8I86_35415
03400 DNA repair and recombination proteins [BR:
sabd03400
]
N8I86_35415
Enzymes [BR:
sabd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N8I86_35415
Messenger RNA biogenesis [BR:
sabd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N8I86_35415
DNA repair and recombination proteins [BR:
sabd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N8I86_35415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
MarR_2
Cas3-like_C_2
PcrA_UvrD_tudor
DUF3553
Motif
Other DBs
NCBI-ProteinID:
UXY39531
LinkDB
All DBs
Position
complement(7835946..7837658)
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AA seq
570 aa
AA seq
DB search
MSDERPGSDEGRTRRLRETAAEVFGWEELRPQQLTAMEYVLQGRDTLVVMPTGSGKSAVY
QVPALLLTGPVVVVSPLLALQRDQIAGLPDGDRAPGAVALNSDLGAAEAEDAWDKVRGGE
VRYVYLSPEQLAKDDVVRRLADARPGLFVVDEAQCVSSWGHDFRPDYLRLAQAARRLGRP
PVLALTATAAPPVRQDIVERLGMDRPRQLVTGFDRPEIRLEARRHLDDDERRRTVVERAA
AEEKPGIVYAATRKDSEFYAAELSALGLAAEAYHAGLRAAERRRIHEAFLAGRTDVVVAT
SAFGMGIDKEDVRFVLHASLPGSLDAYYQEIGRCGRDGRPALAVLHYRTEDTGMQAYFSG
RTPGRDTVATVVRAVHGRGDPAGLDELGRDTGMGRTRLTKAVNLLEEAGAVVTDASGAVG
PVPGTAEAGAVRRATDSAEAHKRMDRSRVDMARAYAETTGCRRRFLLGYFGEEYQEPCGS
CDVCDGPEAERGEGTPGERRPAHPDTGRYPVGAAVRHQRFGRGTVLSEDGDRITVLFDEV
GYRTLALDALAGQDGLLTVTDAPDGRGPGS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgagcgtccgggatcggacgaagggcggacccggcggctgcgcgagacggcc
gcggaggtgttcggctgggaggagctgcgcccgcaacagctcaccgccatggagtacgtg
ctccagggcagggacacgctcgtcgtcatgccgaccgggtccgggaagtccgccgtgtac
caggtccccgcgctgctgctgaccggaccggtggtggtcgtgtcacccctgctggccctc
cagcgggaccagatcgccgggctgcccgacggcgaccgcgcccccggtgccgtggccctg
aactccgacctcggcgcggcggaggcggaggacgcctgggacaaggtgcgcggcggggag
gtccggtacgtctacctctcccccgagcagctcgccaaggacgacgtcgtacggcggctc
gccgacgcgcgccccgggctgttcgtggtggacgaggcccagtgcgtgtcctcctggggc
cacgacttccggcccgactacctgcggctggcgcaggccgcgcggcgcctcggccggcca
cccgtcctcgcgctgaccgccaccgccgctcccccggtccggcaggacatcgtcgaacgg
ctcggcatggaccggccgcgccagctcgtcaccggattcgaccggcccgagatcagactg
gaggcgcgccgtcacctggacgacgacgagcggcggcgcacggtcgtcgagcgggccgcc
gccgaggagaaacccggcatcgtctacgcggcgacccgcaaggacagcgagttctacgcc
gccgagctgagcgcgctcgggctcgcggccgaggcgtaccacgcgggcctgcgcgccgcc
gagcgccggcggatccacgaggccttcctcgcgggccggacggatgtcgtcgtggcgacc
tcggccttcgggatgggcatcgacaaggaggacgtgcgtttcgtgctgcacgcctcgctg
ccgggttccctggacgcctactaccaggagatcgggcgctgcggccgggacgggcgcccc
gccctcgccgtgctgcactaccggaccgaagacaccgggatgcaggcctacttcagcggc
cgcacgcccggccgggacaccgtggcgaccgtcgtacgggccgtgcacggccgcggcgat
ccggcggggctcgacgaactgggacgggacaccggcatggggcgcacccggctgaccaaa
gccgtgaacctcctggaggaggccggcgccgtggtcacggacgcctcgggcgccgtcggg
ccggtcccgggcacggccgaggcgggcgcggtgcgccgggccacggacagcgcggaggca
cacaagcgtatggaccgctcccgggtcgacatggcccgcgcctacgccgagacgaccgga
tgccgacggcgcttcctgctgggctacttcggcgaggagtaccaggagccgtgcggcagc
tgcgacgtctgcgacgggccggaggccgagcgcggcgaggggacgccgggcgagcgtcgt
ccggcgcatccggacaccggccgctatcccgtcggagccgcggtacggcaccagcggttc
ggccgggggacggtactgagcgaggacggcgaccgcatcaccgtgctcttcgacgaggtc
ggctaccggaccctcgccctggacgccctggccggccaggacggtctcctcacggtgacg
gacgcaccggacgggcggggacccggctcctga
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