Sphingomonas abietis: PBT88_00715
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Entry
PBT88_00715 CDS
T09690
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
sabi
Sphingomonas abietis
Pathway
sabi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PBT88_00715 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sabi03400
]
PBT88_00715 (recF)
DNA repair and recombination proteins [BR:
sabi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PBT88_00715 (recF)
BRITE hierarchy
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_22
AAA_29
SbcC_Walker_B
ABC_tran
nSTAND3
AAA_27
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WBO22711
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All DBs
Position
135632..136696
Genome browser
AA seq
354 aa
AA seq
DB search
MSVSRLILTDFRSYGSALIEAGPGFVVLTGENGAGKTNILEALSLLSPGRGLRGAALSEM
ARGDGPGGFAVAARLGADVEIGTGTTAAAPERRQVRVNGAGATANSLSEWLSVLWLTPAM
DRLFSESAGGRRRFLDRLVLALEPGHAHHAARYEAAMRARNKLLAEPEGSDPSWLAALEA
GMAEHGGTLAAARGRTVAALAARLRDQPEGPFARAGLALEGWSGGDLAAELRASRGRDAA
AGRTLVGPHRSDLVVTHLGKDQPAGRCSTGEQKALLLGIVLAHADLVAERTGLPPLLLLD
EVAAHLDPLRRAALFERLALAGGQVWMTGTEPALFEGIGDGTHLRVADGGILRA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctcgcgtctgatcctcaccgattttcgctcttatggttccgccctgatcgag
gcggggccgggcttcgtggtgctcaccggcgagaatggtgcgggcaagaccaacatcctg
gaggcgctttcgctgctgtcgccggggcggggcctgcggggcgcggcgctgtccgagatg
gcgcgcggcgacggccccggcggcttcgcggtcgcggcgcggctgggcgcggatgtcgag
atcggcaccggcaccacggcggccgcgcccgagcgccggcaggtccgcgtcaacggcgcc
ggggcgaccgccaactcgctgtccgaatggctgtcggtgctgtggctgacgccggcgatg
gaccggctgttcagcgagagcgcgggcgggcggcggcgcttcctcgatcgcctcgtgctg
gcgctcgagccgggccatgcccatcacgccgcgcgctacgaggcggcgatgcgcgcgcgc
aacaagctgctcgccgagcccgagggatcggacccgagctggctggcggcgctggaggcg
ggcatggccgagcatggcggcacgctggcggcggcgcgcgggcggacggtggcggcgctg
gcggccaggctgcgcgatcagccggaggggccgttcgcgcgcgccggcctcgcgctggag
ggctggagcggcggcgatctcgccgccgagctgcgcgcctcgcgcgggcgggacgcggcg
gcggggcggaccttggtcgggccccatcgcagcgatctggtcgtcacccatctcggcaag
gaccagccggccgggcgctgctcgaccggcgagcagaaggcattgctgctcggcatcgta
ctcgcccatgccgatctggtggcggaacgcaccgggctgccgccgctgctgctgctcgac
gaggtggcggcgcatctcgatccgctgcgtcgtgccgcgctgttcgagcgcctcgctttg
gccggcgggcaggtgtggatgaccggcaccgaaccggcgctgttcgaggggatcggggac
ggcacccatctgcgcgtcgccgacgggggcatcctgcgcgcctga
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