Sphingomonas abietis: PBT88_00920 Help Entry PBT88_00920       CDS       T09690                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism sabi  Sphingomonas abietis Pathway sabi02020   Two-component system sabi02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:sabi00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     PBT88_00920 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     PBT88_00920 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sabi03021]     PBT88_00920 (rpoN) Transcription machinery [BR:sabi03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      PBT88_00920 (rpoN) BRITE hierarchy Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_3 Sigma70_r4 Phage_CII HTH_31 HTH_Crp_2 Motif Other DBs NCBI-ProteinID:  WBO22747 LinkDB All DBs Position complement(180703..182214) Genome browser AA seq 503 aa AA seqDB search MGLGPRLDLRQSQSLVMTPQLQQAIKLLALSNLEIEAFIAEELEKNPLLDTGTPEEVREP EADFDAEPAEPTDALAGLHGAGDDAPLDVDYAAETFHHDSPSDMIGADGAGAQGMDGALG IDGVTGGNRDGGGEGGDIQDRLASAIGLADHLMAQAGQILSGTDLAIAGHIVDALDEAGY LTVPLVDLAERLGVPLYQVDHVLAVVQTFDPTGVGARDLAECLALQAKEADRYDPCMAKL IAHLDLLARGDLPRLRRICGVDDEDMQDMIRELRAYDPKPGLKFAGGEAQAVTPDVFVAR TAKGWAVELNNATLPRLIVNRSYYAELSGAAQDRSSKAWLNDSLQSANWLMKALDQRART IIKVASEIVKQQDGFFRHGVEHLRPLTLRTVAEAIGMHESTVSRVTSNKYLASPRGLFEL KYFFTSAIQSADGGEAASAQAVKSHIAKLIAEEAPDAILSDDSLVDLLKARGFDIARRTV AKYREALGFGSSVQRRRQKLLSR NT seq 1512 nt NT seq  +upstreamnt  +downstreamnt atggggcttggtccgcgcctcgatctgcggcagtcgcaatcgctggtgatgacgccgcag ctccagcaggcgatcaagctgctggcgctctccaacctcgaaatcgaggcgttcatcgcc gaggagctggagaagaacccgttgctcgataccggcacccccgaggaggtgcgcgagccg gaagccgatttcgacgccgagccggcggagccgaccgatgcgctggccggcctccacggc gccggggacgatgccccgctcgacgtcgactatgccgccgagaccttccaccacgattcc ccctccgacatgatcggtgccgatggcgcgggcgcccaggggatggacggcgccctcggc atcgatggcgtcaccggcggcaaccgggacggcggtggcgagggcggcgacattcaggat aggctggcgagcgcgatcggcctggccgatcatctgatggcgcaggccgggcaaatcctc tccggcaccgatctggcgatcgccggccacatcgtcgatgcgctggacgaggcgggctac ctcaccgtgccgctggtcgatctcgccgagcggctgggcgtgccgctctatcaggtcgat catgtgctggccgtcgtccagaccttcgatccgaccggcgtcggcgcccgcgacctggcc gaatgcctcgccttgcaggcgaaggaggcggatcgctacgatccgtgcatggccaagctg atcgcccatctcgatctgctcgcgcgcggcgatctgccccggctgcgccgcatctgcggg gtggacgacgaggacatgcaggacatgatccgcgaactgcgcgcttatgatcccaagccc ggcctgaaattcgccggtggcgaggcgcaggcggtgacccccgacgtgttcgtggcgcga accgccaagggctgggcggtggagctcaacaatgccaccctgccccgcctgatcgtcaac cgcagctattatgcagaactctccggggccgcacaggatcgttcgagcaaggcctggctc aacgacagcctgcaaagcgccaactggctgatgaaggcgctcgaccagcgcgcccgcacc atcatcaaggtggcgagcgagatcgtgaagcagcaggacggcttcttccgtcacggcgtc gagcatctccggccgctgacgctgcgcaccgtggccgaggcgatcgggatgcacgaatcg accgtcagccgggtcacctcgaacaaatatctcgccagtccgcgcggcctgttcgagctc aaatatttcttcaccagcgcgatccagtccgccgatggcggcgaggcggcatcggcgcag gcggtgaagagccatatcgcgaagctgatcgccgaagaggcccccgacgccatcctgtcc gacgattcgctggtcgatctgctcaaggcccgcggcttcgacatcgcccggcgcacggtc gcgaaatatcgcgaagcgctgggcttcggctcgtcggtccagcgccgtcgccagaaactg ctctcgcgctga

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