Sphingomonas abietis: PBT88_02260
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Entry
PBT88_02260 CDS
T09690
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00061
Fatty acid biosynthesis
sabi00071
Fatty acid degradation
sabi01100
Metabolic pathways
sabi01212
Fatty acid metabolism
sabi02024
Quorum sensing
sabi04146
Peroxisome
Module
sabi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PBT88_02260
00071 Fatty acid degradation
PBT88_02260
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PBT88_02260
09145 Cellular community - prokaryotes
02024 Quorum sensing
PBT88_02260
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sabi01004
]
PBT88_02260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sabi04147
]
PBT88_02260
Enzymes [BR:
sabi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PBT88_02260
Lipid biosynthesis proteins [BR:
sabi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PBT88_02260
Exosome [BR:
sabi04147
]
Exosomal proteins
Exosomal proteins of breast milk
PBT88_02260
Exosomal proteins of breast cancer cells
PBT88_02260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WBO22984
UniProt:
A0ABY7NN78
LinkDB
All DBs
Position
complement(453167..454891)
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AA seq
574 aa
AA seq
DB search
MSDPALASTERPGAADAATTGHKTGNGFGHSPSIPPRRLTDLLDHAVATWPERVAIDFMA
RRWRYAELGALVDRAARGLQDLGVKPGDRVGLCLPNTPYYVALYFATFRIGGIVVNLNPL
YVERELCHLLQDSGCKVIATCDITAIHAKVTRVATQLGLEKLIGCPIAGALPALKSIAYR
LFKRREIASIPPDALHITFARLIASGARPDPVTVKPEDVAVLQYTGGTTGEPKAAMLTHA
NLTANSAQMVAFVGDDLDPAVQERALGVLPLFHVFALTSVLNYSIDTGAMMVLLPRFELK
QMVDTVGRTQCTALFAVPTIYGALNNLPDAQFAKLRSAKRSISGGAPLPFDVRHRFEERM
GSPLVEGYGLSEASPIITCNPLKGEPKDNSAGAAFPGTLIEIRDLEDLSKLMPQGERGEI
CARGPQVMKGYWHRPDADAEVFIDGALRTGDVGYLDEDGYLFIVDRMKDLIIAGGYNVYP
RTIEEALYEHPAIAEAVVIAVDDRYRGQAPKAFVSLKAGHSVAPLELHDFLKDKLSKIEM
PREIEIRDNLPKTLIGKLSKKELVAEEKAKAAMG
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatccggccctcgcatcgaccgaacggccgggcgctgcggacgcggcgacgacg
ggccataagacggggaacggcttcggccattccccgtcgatcccccctcgccggctgacc
gacctgctcgatcatgccgtcgcgacatggccggagcgggtcgcgatcgatttcatggcg
cggcgctggcgctatgccgaactcggcgcgctggtcgatcgcgccgcgcgcggcttgcag
gatctcggggtcaagccgggcgaccgggtcggcctgtgcctgcccaacacgccttattat
gtcgcgctctacttcgcgaccttccggatcggcggcatcgtcgtcaatctgaacccgctc
tatgtcgagcgcgagctctgccacctgctccaggattcgggctgcaaggtgatcgccacc
tgcgacatcaccgcgatccatgccaaggtcaccagggtggcgacgcagctcgggctggaa
aagctgatcggctgcccgatcgccggggcgctgccggccctcaagtcgatcgcctaccgc
ctgttcaagcgccgcgagatcgcctcgatcccgcccgacgcgctccatatcaccttcgcc
cggctgatcgcatccggcgcgaggcccgatccggtgacggtgaagcccgaggacgtcgcc
gtgctgcaatataccggcggcaccaccggcgagcccaaggcggcgatgctcacccacgcc
aacctgaccgccaacagcgcccagatggtggccttcgtcggcgacgatctcgatccggcg
gtgcaggagcgtgcgctcggcgtgctgccgctgttccatgtcttcgcgctgaccagcgtg
ctcaattactcgatcgacaccggcgcgatgatggtgctgctgccccgcttcgagctgaag
cagatggtcgataccgtcgggcggacgcaatgcaccgccttgttcgcggtgccgaccatc
tatggcgcgctgaacaatctgccggatgcccaattcgccaagctgcgctcggccaagcgc
tcgatctcgggcggcgcgccgctgccgttcgacgtgcgccaccgcttcgaggagcgaatg
ggatcgccgctggtcgaaggctatggcctgtccgaggcttcgccgatcatcacctgcaac
ccgctgaagggcgagcccaaggacaatagcgccggcgccgccttccccggcaccctgatc
gagatccgcgacctcgaagacctgtcgaagctgatgccgcagggcgagcgcggcgaaatc
tgcgcgcgcgggccgcaggtgatgaagggctattggcaccggccggatgccgatgccgag
gtcttcatcgacggcgcgctgcgcacgggcgacgtcggctatctggacgaggacggctat
ctcttcatcgtcgatcggatgaaggatctgatcatcgcgggcggctacaacgtctatccg
cgcacgatcgaggaagcgctctacgagcatcccgcgatcgcggaggcggtggtgatcgcg
gtcgacgacagatatcgcgggcaggcgcccaaggcgttcgtgtcgctcaaggccggccac
agcgtcgcgcccctcgagctgcacgacttcctcaaggacaagctcagcaagatcgaaatg
ccccgcgagatcgaaatccgcgacaatctgccaaagacgcttataggcaagctatccaaa
aaagaactggtcgccgaggagaaggcaaaggcggcaatgggttga
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