Sphingomonas abietis: PBT88_03790
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Entry
PBT88_03790 CDS
T09690
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sabi
Sphingomonas abietis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sabi02000
]
PBT88_03790
Transporters [BR:
sabi02000
]
Other transporters
Pores ion channels [TC:
1
]
PBT88_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WBO23271
UniProt:
A0ABY7NUY5
LinkDB
All DBs
Position
809308..811665
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AA seq
785 aa
AA seq
DB search
MSRISRALFCAPFLPWAPCATAHAQTVSPIITAGADTARPDDILVIGQNKHPIAIEPRGL
SVSLGDAQFAGVNATNVEDLIKYAPDFFVRSRYIGDNNGVPGFRGTHSTQSARTLVMVDG
FVISDFLGNSFSYPPAWGVVSPHEVQQFDIVYGPYSARYVGNSMGGIVNITTRAPEKTEA
FFNLQNFYQPYDQFKSHDDLWGHSAEGGFAWKPRDSSWGARLSARRLINQAQPMQYYQLG
YSAAVYDNPTAGTPILGAVVDPKLMPATGTKVVTPVVGDYSMILSRQDQTRAELRYDQGD
VHSELLFAYWWNEEKTLDPASYITDAAGNPFYGNSSGLVSFGGHSYTLNAASSFRQGLFF
KNEYLVGGKIEAPLAGFDVRLNLSTLRFARQDSYQSNGYAAGLADGAGQWTRQGPTGWYT
GDLLATRTIGRHALAFGVDASLYETDQSVFNTSHWREGSDPALTTRTFGRNTTVGVFAED
AIAFGDATKLTVGARYDRWHAYDGGIIAVASSGAQAGLPVTQHYAGRTDHAWSPKVALRH
IFAGDWVAELSLAMATRFPTVGELFQGSLNGDGSFNANSFDPTLKPERSKDANLLLRHRF
GPVTLTGSAFYQRVHNSIFNFLGFNQNGVSTSSFKNIDITRQYGVELIAETHNWPIDRLD
MDGNAAWIDAITVKNPSDPASEGVAFPRIPRWRLNGNLRYRVTPTLQAVIGVRYASRPNS
DIDGLYRGDDYGYTSELFALDLRANYDVSKRLRFSAGVNNLTNDKAWVYHPYPQRTFLME
AGVKL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcatttcccgcgcgctgttctgcgcgccctttctgccgtgggcgccgtgcgcc
acggcccatgcccagactgtcagcccgatcatcaccgccggtgcggatacggcgcggccc
gacgacatcctcgtgatcgggcagaacaagcatccgatcgcgatcgagccgcgcggtctg
tcggtgagcctcggcgacgcgcaattcgccggggtcaacgccaccaatgtcgaggatctg
atcaaatatgcgcccgatttcttcgtgcgcagccgctatatcggcgacaataacggcgtg
cccggctttcgcggcacgcacagcacccagtccgcccgcacattggtgatggtggatggc
ttcgtgatctccgatttcctcggcaattcgttcagctatccgccggcctggggggtggtg
agcccccatgaggtgcagcagttcgacatcgtctacgggccttattcggcccgctatgtc
ggcaattcgatgggcggcatcgtcaacattacgacgcgcgcgccggagaagaccgaggcg
ttcttcaacctccagaatttctaccagccctatgaccagttcaaatcccacgatgatctg
tgggggcattcggccgagggcggcttcgcctggaagcccagggacagttcatggggtgcc
cgcctgtctgcgcggcgactgatcaatcaggcgcagccgatgcaatattaccagctcggt
tattcggcagcggtctacgacaacccaacggcgggcacgccgatcctcggcgcggtggtc
gatccgaagctgatgccggcgacgggcaccaaggtggtgacgccggtggtcggcgattat
tccatgatcctcagccggcaggaccagacccgcgccgaactgcgctacgatcagggcgac
gtgcatagcgaattgctgttcgcctattggtggaacgaggaaaagacgctcgatcccgcc
agctacatcaccgatgccgccggcaatcctttctatggcaacagcagcggtctcgtcagc
ttcggcgggcatagttatacgctgaacgccgcgagcagcttccgccagggcctgttcttc
aagaatgaatatctcgtcggcggcaagatcgaggcgccgttggcgggtttcgatgtgcgg
ctcaacctttcgacgctgcgcttcgcgcggcaggacagctatcagtccaacggctacgca
gccggcctcgccgatggcgccgggcaatggacccggcaggggccgaccggctggtatacg
ggcgatctgctggcgacccgcaccatcggccgccacgcgctggccttcggcgtcgatgcc
agcctctacgaaaccgatcagagcgtcttcaacacatcacattggcgggagggttccgat
cccgcgctcaccacgcggaccttcggtcgcaatacgacggtcggtgtgtttgccgaggat
gcgatcgcgttcggcgatgcgaccaagctgaccgtcggcgcgcgctatgatcgctggcac
gcttatgacggcggcatcatcgcggtggcgagcagcggcgcgcaggcggggttgccggtg
acccagcattatgccggccgcaccgaccatgcatggagccccaaggtggcgctccgccat
atcttcgcgggagactgggtggcggaactcagcctcgccatggcgacgcgcttcccgacc
gtcggcgagctgttccagggatcgctgaacggcgacggcagcttcaacgccaacagcttc
gatccgaccctgaagccggagcggagcaaggacgccaatctgctgctgcgccatcgcttc
gggccggtgacgctgaccggcagcgccttctaccagcgtgtccacaacagcatcttcaac
ttcctcggcttcaaccagaacggggtttcgacctccagcttcaagaatatcgacatcacc
cgccaatatggcgtcgaactgatcgccgagacgcataattggccgatcgatcgcctcgac
atggacggcaacgccgcctggatcgatgcgatcacggtgaagaacccgtccgatccggca
tccgaaggcgtggcgtttccgcgtatcccgcgctggcggctcaacggcaatctgcgctac
cgggtgacgcccacgcttcaggcggtgatcggggtgcgctatgccagccggcccaacagc
gatatcgacggcctctatcgcggcgacgattatggctacacgtccgaactgttcgcgctc
gatctgcgtgccaattacgatgtgagcaagcggctgcgcttctcggccggggtcaacaac
ctcaccaacgacaaggcgtgggtctatcatccctatccccagcggaccttcctgatggaa
gcgggggtgaagctgtga
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