Sphingomonas abietis: PBT88_04460
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Entry
PBT88_04460 CDS
T09690
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00470
D-Amino acid metabolism
sabi00550
Peptidoglycan biosynthesis
sabi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PBT88_04460 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PBT88_04460 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sabi01011
]
PBT88_04460 (murD)
Enzymes [BR:
sabi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PBT88_04460 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sabi01011
]
Precursor biosynthesis
Amino acid ligase
PBT88_04460 (murD)
BRITE hierarchy
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
DUF2478
Hpf1_C
Motif
Other DBs
NCBI-ProteinID:
WBO23389
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All DBs
Position
931747..933213
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AA seq
488 aa
AA seq
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MITSAAFVGKRYAVLGLARSGLATVRALVASGAQVTAWDSDEAKRNALPLPSGERVGVRG
SEPQASVPAIGADHPHPTLSPKGEGFSWGDPMLIDLTGFDGIVVSPGVPLNTHPIASRGR
EAGVPIIGDIELFAQARASLPDHKVVAITGTNGKSTVTALIHHILQTAGVPTTLGGNIGL
PILGQEPLPAGGVYVLELSSFQIDLTHSLAADVSVLTNITPDHLDRYDGFTGYAASKARL
FAMQRPGQSAVIATDDEPTRALAVHLSRAVLPPLAMDGLLGAPLGMPPIPAGPTVVAVSA
GDVTDQSAWPALQGPHNAQNVAIARAACRLLGIDDAAIEQGLRTYPGLPHRMERIAELAG
VLYVNDSKATNATSTAPALGAYPKIHWILGGKRKTDDLDACKPYYGHVVAAYTIGEAAEL
FERILLESGIYARNLGTLDAAVKAAAQVARPGETVLLSPACASYDQFRDYEARGDAFRAA
VAMLGTGA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacgtcggccgccttcgtcggcaagcgctatgcggtgctggggctggcgcgctcc
ggcctcgcgaccgtgcgtgcgctggtggcgagcggcgctcaggtcacggcttgggacagc
gacgaggcgaagcgcaacgcgctccctctccccagcggggagagggtcggggtgaggggg
agcgagccgcaggcgagcgtcccagccatcggcgcggaccaccctcacccaaccctctcc
cccaagggagagggcttcagctggggcgatcccatgctgatcgacctcaccggcttcgac
ggcatcgtcgtctcgccgggcgtgccgctcaacacccacccgatcgcgtcgcgcgggcgg
gaggccggcgtgccgatcatcggcgacatcgagctgttcgcgcaggcgcgggcttcgctg
cccgatcacaaggtcgtcgcgatcaccggcaccaacggcaaatcgaccgtcaccgcgctg
atccaccatatcctccagacggcgggcgtgccgacgacgctgggcggcaatatcgggctg
cccatcctcgggcaggagccgttgccggccggtggcgtctacgtgctggaattgtcgagc
ttccagatcgatctgacccacagccttgccgccgatgtgagcgtgctgaccaacatcacg
ccggaccatctcgatcgctatgacggcttcaccggctatgccgcgtcgaaggctcgcctg
ttcgcgatgcagcggcccggccagtccgccgtgatcgccaccgacgacgagccgacccgc
gcgctcgccgtacatctttcgcgcgcggtgctgccccctttggcgatggacggcctgctc
ggcgcgccgctcggcatgccgccgattccagccggcccgacggtggtcgcggtctccgcc
ggtgacgtcaccgaccagtcggcatggcccgcgctgcaaggcccgcacaacgcccagaac
gtcgcgatcgcgcgcgccgcctgccgcctgctcggcatcgacgacgccgcgatcgagcag
gggctgcgcacctatcccggcctgccgcaccgcatggagcggatcgccgagctcgccggg
gtgctctacgtcaacgacagcaaggcgaccaacgcgacctccaccgcgccagcgctcggc
gcctatccgaagatccactggatcttgggcggcaagcgcaagaccgacgatctggacgcc
tgcaagccctactacggccatgtcgtcgcggcctatacgatcggcgaggcggccgaactg
ttcgaacgcatcctgttggaatccggtatctacgcacgcaacctcggcacgctcgatgcc
gcggtgaaggctgccgcacaggtggcccggcccggcgagacggtgttgctctcacccgcc
tgcgcctcctacgatcagtttcgcgattatgaggcgcggggcgatgcgtttcgtgcggcg
gtggcgatgctggggacgggggcatga
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