Sphingomonas abietis: PBT88_05165
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Entry
PBT88_05165 CDS
T09690
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00260
Glycine, serine and threonine metabolism
sabi00460
Cyanoamino acid metabolism
sabi00630
Glyoxylate and dicarboxylate metabolism
sabi00670
One carbon pool by folate
sabi00680
Methane metabolism
sabi01100
Metabolic pathways
sabi01110
Biosynthesis of secondary metabolites
sabi01120
Microbial metabolism in diverse environments
sabi01200
Carbon metabolism
sabi01230
Biosynthesis of amino acids
sabi01240
Biosynthesis of cofactors
sabi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PBT88_05165
09102 Energy metabolism
00680 Methane metabolism
PBT88_05165
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PBT88_05165
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PBT88_05165
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PBT88_05165
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PBT88_05165
Enzymes [BR:
sabi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PBT88_05165
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WBO23520
LinkDB
All DBs
Position
complement(1073335..1074639)
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AA seq
434 aa
AA seq
DB search
MSTQPAPTPAIRKSGFFTQGLAEADPAIFAGVEHELHRERHQIELIASENIVSKAVLEAQ
GSVFTNKYAEGYPGKRYYQGCAPSDEVEQLAIDRAKQLFGCQFANVQPHSGAQANGAVML
ALTKPGDTIMGLSLDAGGHLTHGAKAAMSGKWYNAVQYGVKPDTHLIDYDQVEALAREHK
PTLIIAGGSAYPRHIDFARFRAIADAVGAKFMVDMAHFAGLVAGGVHPTPFGHADVVTTT
THKTLRGPRGGAIFTNDEAIAKKINSAVFPGLQGGPLMHVVAAKAVAFGEALQPEFKTYA
QAIIDNAKALASRLQERGAAVISGGTDTHLALIDLTPLGVTGKDADEALERSAITCNKNG
IPFDPLPPMKTSGIRVGSPAGTTRGFGIAEFRDIADMIADVLDGLRKNGEQGDAQVEAQV
RARVQALCERFPIY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccagcccgcccccacccccgccatccgcaagagcggcttcttcacccagggc
ctcgccgaggccgatcccgcgatcttcgccggggtggagcatgagctgcatcgcgagcgc
caccagatcgagctgatcgcctccgagaacatcgtctccaaggcggtgctcgaggcccag
ggttcggtgttcaccaacaaatatgccgagggctatcccggcaagcgttactatcagggc
tgcgcgccgtccgacgaggtcgagcagctcgccatcgatcgcgccaagcagctgttcggc
tgccagttcgcgaacgtccagccgcattcgggcgcgcaggccaatggcgcggtgatgctg
gcgctgaccaagcccggcgacacgatcatgggcctcagcctcgatgccggcggccacctc
acccacggcgccaaggcggcgatgtcgggcaaatggtacaatgccgtgcaatatggcgtg
aagccggacacccacctgatcgattacgaccaggtcgaggcactcgcccgcgagcataag
ccgacgctgatcatcgccggcggctcggcctatccgcgccacatcgatttcgcccgcttc
cgcgcgatcgccgacgcagtgggcgcgaagttcatggtcgacatggcgcatttcgccggt
ctggtcgcaggcggcgtccacccgacgccgttcggtcatgccgatgtcgtcaccaccacc
actcacaagacgctgcgcggcccgcgcggcggcgcgatcttcaccaatgacgaggcgatc
gccaagaagatcaactcggcggtgttcccggggctccagggcggcccgctgatgcacgtc
gtcgccgccaaggcggtggcgttcggcgaggcgctccagcccgagttcaagacctatgcg
caggcgatcatcgacaatgccaaggcgcttgccagccgcctccaggagcgcggtgcggcg
gtgatctccggcggcaccgacacccatctggcgctgatcgacctcaccccgctcggcgtc
accggcaaggatgccgacgaggcgctggagcgttcggcgatcacctgcaacaagaacggc
atcccgttcgacccgctgccgccgatgaagaccagcggcatccgcgtcggctcgccggcc
ggcaccacccgcggcttcggcatcgccgagttccgcgacatcgccgacatgatcgccgac
gtgctcgatggcctgcgcaagaatggcgagcagggcgacgcgcaggtcgaagcccaggtc
cgcgcccgcgtgcaggcgctgtgcgagcgcttcccgatctattga
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