Sphingomonas abietis: PBT88_06085
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Entry
PBT88_06085 CDS
T09690
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PBT88_06085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sabi03400
]
PBT88_06085
Enzymes [BR:
sabi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PBT88_06085
DNA repair and recombination proteins [BR:
sabi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PBT88_06085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
SOGA1-2-like_CC
HR1
Exo84_C
Adenylate_cycl_4th
Motif
Other DBs
NCBI-ProteinID:
WBO23687
UniProt:
A0ABY7NR73
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All DBs
Position
1248193..1248435
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AA seq
80 aa
AA seq
DB search
MADTPIAELSFEDALKRLETIVQQLESGDVPLEKSIELYGEGDRLRAQCEQRLKSAQAKI
DQIQLGGDGAPATLRPFDAE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaccccaatcgccgagctgagtttcgaggacgcgctgaagcgcctggaaacg
atcgtgcagcagctcgaaagcggcgacgtcccgctcgaaaagtcgatcgaactctatggc
gaaggggacaggctgcgcgcccagtgcgagcagcgactcaagagcgcgcaggcgaagatc
gaccagattcaactcggcggcgatggcgcccccgcaaccctcaggcccttcgatgccgag
tga
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