Sphingomonas abietis: PBT88_07710
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Entry
PBT88_07710 CDS
T09690
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00550
Peptidoglycan biosynthesis
sabi01100
Metabolic pathways
sabi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PBT88_07710 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PBT88_07710 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sabi01011
]
PBT88_07710 (mrdA)
Enzymes [BR:
sabi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PBT88_07710 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sabi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PBT88_07710 (mrdA)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WBO23986
LinkDB
All DBs
Position
complement(1566407..1568542)
Genome browser
AA seq
711 aa
AA seq
DB search
MKFGSGRRPGRLVTEAHQSFSFTRRAMFLGAAQGGVGLLLVGRMAWLTVAQHDKYAALAE
SNRARSTLIPPRRGWIVDRTGQPIAINRSDFRVDVIPDLLVDEEAEIALLQTILQLLPED
VERLHDNLPKAAGFQPVQVAEDLDYEHFAAVNLRLPDLPGVVPARGFSRFYPTGPAVAHL
IGYVGSASAEDYKKDKNPLLITPGFKIGKQGLEKIYEQLLRGQPGMKPSEVTARGKLVRE
LPAKPEMPGRTLQLTIDAGLQAYIAERMGDQSGSAVVIDTENGDILAMVSMPAYDPNSFS
KGISHDEWNMLSADDHLPLVNKSLQGLYPSGSTVKPMNALGLLEAGISPDEHVLCTGQYR
VGNSFFHCWKHGGHGSIDMHRAVQQSCDIYFYQMARKVGTKVLADTLKRLGLGQKFDMPF
PSQRYGTVPDPDWKLRKYHKPWTVSDTLNSSIGQGYTLVNPLQLAVAAARIASGKALVPR
IVHRRHDQPPASLGVSEDHLRIVHEAMGAVVGPGGTAGTARIQIPGVDMAGKTGSAQVRH
ISMAARAAGRAKALGDSGEWRLRDHGLFIAFAPVEQPRYAAAVILEHAGHATVGAQIARD
AFTYLYDKQKALDTLAKLQPSWGGDIATRMTRQRAEWAAAHATAPEPDALPADAGDLSAQ
ANAATPPDVSASTAVAPPSEGPDNSQAPVKAPSGTAAAPPATPPATGDVPE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgggtccggccggcgccccggccgcctcgtcaccgaggcccatcaaagcttt
tccttcacccgccgcgcgatgttcctgggcgccgcacagggcggcgtcggcctgctgctg
gtcggccgcatggcgtggctcaccgtcgcccagcacgacaaatatgccgcattggccgaa
agcaaccgcgcccgctccaccctgatcccgccgcggcgcggctggatcgtggatcgcacc
ggccagccgatcgcgatcaaccgttccgatttccgcgtcgacgtcatccccgatctgctg
gtcgacgaggaggccgagatcgccctcctccagacaatcctccagctcctccccgaagat
gtcgagcggctgcacgacaatctgcccaaggcggccggtttccagccggtgcaggtcgcc
gaggatctcgattacgagcatttcgcggcggtcaatctgcgcctgcccgatctgcccggc
gtcgtgcccgcgcgcggcttctcccgcttctacccgaccgggccggcggtggcgcatctg
atcggctatgtcggttcggcctcggcggaggactacaagaaggacaagaacccgctgctg
atcacacccggcttcaagatcggcaagcaaggccttgagaagatatacgaacagcttctg
cgcggccagcccggcatgaagccgtccgaagtcaccgcgcgcggcaagctggtgcgggaa
ctgcccgccaagccggagatgccggggcgcacgctccagctcaccatcgatgccggtctt
caggcctatatcgccgagcggatgggcgaccagtccggctcggcggtggtgatcgacacc
gagaatggcgacatcctcgcgatggtctcgatgcccgcttacgatcccaacagcttctcc
aagggcatcagccacgacgaatggaacatgctgtcggcggacgatcatctgccgctggtc
aacaaatcgttgcagggactctatccatcgggatcgacggtcaagccgatgaacgcgctg
gggctgctcgaggcgggcatctcaccggacgagcatgtcctgtgtaccggccaatatcgg
gtcggcaacagcttcttccattgctggaagcatggcggccacggatcgatcgacatgcat
cgcgccgtccagcagagctgcgacatctatttctaccagatggcgcgcaaggtcggcacc
aaggtgctagcggatacgctcaagcgtctcggactggggcagaaattcgatatgcccttc
ccgtcccagcgctatggcacggtgccggacccggactggaaactgcgcaaatatcacaag
ccatggacggtcagcgacacgctgaactcgtcgatcggccagggctataccttggtcaac
ccgctccagctcgccgtggcggcggcccgcatcgccagcggcaaggcgctggtgccccgc
atcgtccaccggcgccacgatcaaccgccggcctcgctcggcgtctccgaggaccatctg
cggatcgtccacgaggcgatgggcgccgtggtcggcccgggcggcaccgccggcaccgcc
cgcatccagattcccggcgtcgatatggcgggcaagaccggctccgcgcaggtccgtcac
atcagcatggcggcgcgcgccgccggccgcgccaaggcgctcggcgacagcggcgaatgg
cgcctgcgtgaccatggcctgttcatcgccttcgcccccgtcgagcagccccgctacgcc
gcggccgtgatcctcgaacatgccggccacgccaccgtcggcgcgcagatcgcccgcgac
gccttcacctatctatacgataagcagaaggcgctcgacacgctggccaagctgcaacct
tcctggggcggcgacatcgccacccggatgacccgccagcgcgccgaatgggcggccgcc
catgccaccgcgccggagcccgacgcgctgcccgccgacgccggcgatctcagcgcgcag
gccaatgccgcgaccccgccggacgtctccgcctccaccgccgtggcgccgccgtccgag
gggccggacaatagccaggcgcccgtcaaggcaccgtccggcaccgccgccgccccaccg
gccaccccacccgccaccggagacgtgcccgaatga
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