Sphingomonas abietis: PBT88_07870
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Entry
PBT88_07870 CDS
T09690
Name
(GenBank) autotransporter domain-containing protein
Organism
sabi
Sphingomonas abietis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
WBO24015
UniProt:
A0ABY7NT88
LinkDB
All DBs
Position
complement(1605558..1608692)
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AA seq
1044 aa
AA seq
DB search
MRHLFATTCLTPIAFGLIAAPALAATATIGAAQTTPVLTSTANAGSAADVSITSAGSIAP
TVAGAAVTLDSNNSVTNAGAISYSGVSGTSGILANAGVTGTITNSGTITDNETYVRTDTN
GDGVLDGAYAQGSDRYGIRTPGGLAGNVVNSGTITVEGNDSAGIALGGTLTGSLQQSGTI
TVTGDRSVGISTGAITGDASIGGTISASGTNASGVLLNGDVGGALVVQATITSTGYSATT
APTDLTKLTAANLLQGGPTMQISGNVAGGALFTAATSTTDSSGTTTATTASALTSYGSAP
ALLVGATDHAITLGAVASDTAKHGLVLNGTIAGLGVYDGFAANGLVIGGQGGAVTIANGM
TQAGTVSATSNDASATAIRIGSGASVPEIVNSGTISATGATKATDASVGIQIDAGSSIAT
ITNSGSITTTAGTAASDTAILDKSGNVTIVTNSGTISATGSTATNVAIDLSAATANTTVS
QPAAASGGTTPAITGDIRFGSGNDNLVIAGGTVTGNVSFGAGSNSMALSGTSTYTGTTDF
GGGTDSLSLSGTASFSGAIVNGGGLAVKLAGGTLALSGTGATTIGSLAVSGGGTLGVTID
GTTGASTLYQVSGAASFDTGSKLALHFSDLNYTAGTYTVITAGSLSGVGNLSTTGVALPW
LFESQVATNAAGNGVNVIVTRKTAAELGLNRSESSAYNAIYAAIAGDKPIGDSFLNFSDS
ASFKAGLRSLMPDFAGASFDTVTSGSRATARFLADPDAPLVDEGKWGFWLQQVGWGHTKS
IGDTAGYRITGWGASGGAEIKAGGFGRFGLSLAYLSGTNDDAGSDNDVDSSHYELGVYWR
ADWGGLHAFARGSAATIDFKSHRRFEGMDGTTQVLRTAEGDWNGKLYSGAAGLSYRLELG
KFSLRPQASLDYYKLHEGHYAEAGGGTGMDLIVNARDSDQSAANGAIALGYNFFDSTADD
GGFLRTEIEGGRRQLIGGKLGDTTAHFAGGDDFTLTPDDPTSGWTGAFRIKGGATGYVIS
GELDGEKQDSHVAVALRAGLQVGF
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcacctgttcgccaccacctgcctgacgccgatcgcgttcgggctgatcgctgcc
cccgcgctggccgcgaccgcgaccatcggcgcggcgcagacgacgcccgtcctcacctcg
acggcgaacgcgggcagcgctgccgatgtcagcatcaccagcgccggatcgatcgcgccg
accgtggccggcgccgccgtcaccctcgacagcaacaacagcgtcaccaatgccggcgcg
atcagctatagcggcgtgagcggcaccagcggcatcctcgccaatgccggcgtgaccggc
acgatcaccaacagcggcaccatcaccgacaacgagacctatgtccgcaccgacaccaat
ggcgatggcgtgctcgacggggcctatgcgcagggatcggatcgctacggcatccgcacc
cccggcgggttggccggcaatgtcgtgaacagcggcacgatcaccgtggagggcaatgat
tccgccggcatcgcgctcggcggcacgctcaccggatcgttgcagcagagcggcacgatc
accgtcaccggcgatcgcagcgtcggcatcagcaccggcgcgatcaccggcgacgccagc
atcggcggcacgatctccgccagcggcaccaacgcctcgggcgtgctcctcaacggcgat
gtcggcggggcattggtggtccaggccaccatcacatcgaccggctatagcgcgaccacg
gcaccgaccgatctcaccaaactgaccgccgccaacctgttgcaaggcggcccgacgatg
cagatcagcggcaatgtcgccggcggagcgctgttcaccgccgcgacgtcgaccaccgat
tcgagcggcaccacgaccgccaccaccgcctccgcgctgacctcctatggcagcgccccg
gcgctgctcgtcggcgcgaccgatcatgcgatcacgctcggcgcggtggcgtcggacacc
gccaagcacggcctcgttctcaacggcacgattgcgggcctcggcgtctatgatggcttt
gccgccaacggcctggtcatcggcggacaaggtggcgcggtgacgatcgccaacgggatg
acccaggccggaacggtatcggccacctccaacgatgcgagcgcgaccgcgatccgcatc
ggcagcggtgccagcgtgccggagatcgtcaacagcggcacgatctcggccaccggcgcc
accaaggcgaccgacgccagcgtcggcatccagatcgatgccggatcgagcatcgccacg
atcaccaactcgggatcgatcaccaccaccgcaggcaccgcggcgagcgacaccgcgatc
ctcgacaaatcgggcaacgtcaccatcgtcaccaacagcggcacgatctcggcgaccgga
tcgaccgccaccaacgtcgccatcgatctctcggcggcgaccgccaataccaccgtatcg
cagcctgccgccgcctcgggcggaaccacgccggcgatcaccggcgacatcaggttcggc
agcggcaatgacaatctggtgatcgcgggcggcaccgtaaccggcaatgtcagcttcggc
gcgggcagcaacagcatggccctgtccggcacctcgacctacaccggcaccaccgatttc
ggcggcggcaccgacagcctcagcctttcgggcacggccagcttcagcggcgccatcgtc
aatggcggcggcctcgccgtcaaactcgccggcggcacgctggcgctgagcggcaccggc
gcgaccacgatcggatcgctggcggtcagcggcggcggcacgctgggcgtcactatcgac
ggcaccaccggcgcctcgaccctctatcaggtcagcggcgcggccagcttcgacacggga
tcgaagctggcgctgcacttctccgatctcaactacaccgccggcacctacacggtgatc
acggccggctccctgtctggcgtgggcaatctctcgaccaccggcgtcgccctgccctgg
ctgttcgagagtcaggtcgctaccaacgccgccggcaatggcgtcaacgtcatcgtcacc
cgcaagacggcggccgaactcggcctcaatcgatcggagagcagcgcttataacgcgatc
tacgcggcgattgcgggcgacaagccgatcggcgacagcttcctcaacttctcggacagc
gccagcttcaaggccggcctgcgctcgctgatgcccgatttcgccggcgccagcttcgac
accgtgacctccggctcgcgcgccaccgcgcgtttcctcgccgatcccgatgcgccgctg
gtcgatgagggcaaatggggcttctggctgcaacaggtcggctggggccacaccaagtcg
atcggcgacaccgcgggctaccgcatcaccggctggggcgcatccggcggcgccgagatc
aaggccggcggcttcggccgcttcggcctgtcgctcgcctatctgtccggcaccaacgac
gacgccggcagcgacaatgacgtcgattcgagccattatgaactcggcgtctactggcgt
gccgattggggcggcctccacgccttcgcccgcggatcggcggcgacgatcgacttcaag
agccatcgccggttcgagggtatggacggcaccacccaggtgctgcgcaccgccgagggc
gattggaacggcaagctctattcgggcgcggcgggcctttcctaccggctcgaactcggc
aaattctcgctgcgtccgcaggcgtcgctcgattattacaagctgcacgagggccattat
gccgaggccggtggcggcaccggcatggacctgatcgtcaacgcccgcgacagcgaccag
tccgccgccaatggcgcgatcgcgctcggctataatttcttcgactcgaccgccgacgat
ggcggcttcctgcgcaccgagatcgagggcgggcgacgccagctgatcggcggcaagctg
ggcgacaccaccgcccacttcgccggcggcgacgacttcaccctcacccccgacgatccc
accagcggctggaccggcgcgttccgcatcaagggcggcgccaccggctatgtgatcagc
ggcgaactcgatggcgaaaagcaggacagccacgtcgccgtggcgctgagggccggcctc
caggtcggcttctga
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