Sphingomonas abietis: PBT88_08290
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Entry
PBT88_08290 CDS
T09690
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sabi
Sphingomonas abietis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sabi03032
]
PBT88_08290
03036 Chromosome and associated proteins [BR:
sabi03036
]
PBT88_08290
03400 DNA repair and recombination proteins [BR:
sabi03400
]
PBT88_08290
DNA replication proteins [BR:
sabi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PBT88_08290
Chromosome and associated proteins [BR:
sabi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PBT88_08290
DNA repair and recombination proteins [BR:
sabi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PBT88_08290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
GTP_EFTU_D2
HU-CCDC81_euk_1
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WBO24095
LinkDB
All DBs
Position
1704089..1704361
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQELIGAVAESAGLTRSDASKAVESVFDSITGTLKKGDEVRLVGFGTFSVSKRKASTG
RNPRTGEPMSIAASSQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggagcttatcggcgcggtggcggaatcggcgggcttgacgcgcagcgat
gcgagcaaggccgtggagagcgtgttcgacagcatcaccggcacgctcaagaagggtgac
gaggttcgcctcgtcggcttcggcaccttttctgtcagcaagcgcaaggcatcgaccggg
cgaaacccgcgcaccggcgagccgatgtcgatcgcggcctcgagccagcccaaattcaag
gcgggcaagggcctgaaggacgccgtcaactaa
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integrated database retrieval system
