Sphingomonas abietis: PBT88_08475
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Entry
PBT88_08475 CDS
T09690
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sabi
Sphingomonas abietis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sabi03016
]
PBT88_08475 (truA)
Enzymes [BR:
sabi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PBT88_08475 (truA)
Transfer RNA biogenesis [BR:
sabi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PBT88_08475 (truA)
Prokaryotic type
PBT88_08475 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
AAA_25
Orbi_VP5
Motif
Other DBs
NCBI-ProteinID:
WBO24128
LinkDB
All DBs
Position
complement(1738382..1739125)
Genome browser
AA seq
247 aa
AA seq
DB search
MTRFRLTVEFDGRPFMGWQRQAHGPSVQQVIEEAVQRVTGEAATVYAAGRTDAGVHATGM
AAHVEIGKPITPFRLMEAINGLARPHPVAILACETVPDDWHARFSCIGRRYIYRIAERRA
PLTLDLGKAWRLRPPLDAEAMHAAAQHLVGRHDFTTFRSTHCQSASPVKTLDRLDVRRVA
GGIEVEAAARSFLHHQVRSMVGCLALVGQGKWSPDDMAAALAAADRSRLGLNAPPDGLYF
VEALYPA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgtttccggctgaccgtggagttcgatggccgcccgttcatgggctggcagcgg
caggcccatggcccgagcgtccagcaggtgatcgaggaggcggtgcagcgggtcaccggc
gaggccgccaccgtctacgccgccgggcgcaccgacgccggggtccatgccaccggcatg
gcggcgcatgtcgagatcgggaagccgatcacgccgttccggctgatggaggcgatcaac
ggcctcgcccggccgcatccggtggcgatcctcgcctgcgaaaccgtgccggacgactgg
catgcgcgcttctcctgcatcggccggcgctacatctatcgcatcgccgaacgccgcgcc
ccgctgacgctggacctcggcaaggcctggcggctgcgcccgccgctcgatgccgaggcg
atgcacgcagcggcgcagcatctggtcggccggcacgacttcaccaccttccgctcgacc
cactgccagtcggccagcccggtcaagacgctcgaccggctcgacgtgcggcgggtggcg
ggcggcatcgaggtggaagcagcagcgcgctccttcctccaccaccaggtccgctcgatg
gtcggctgcctggcgctggtcgggcagggcaaatggtcgcccgacgacatggccgccgcg
ctggccgccgccgaccgctcccgcctgggcctcaacgcaccgccggacgggctgtatttc
gtggaagcgctctaccccgcctga
DBGET
integrated database retrieval system
