Sphingomonas abietis: PBT88_08660
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Entry
PBT88_08660 CDS
T09690
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PBT88_08660 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sabi01007
]
PBT88_08660 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sabi03016
]
PBT88_08660 (aspS)
03029 Mitochondrial biogenesis [BR:
sabi03029
]
PBT88_08660 (aspS)
Enzymes [BR:
sabi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PBT88_08660 (aspS)
Amino acid related enzymes [BR:
sabi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PBT88_08660 (aspS)
Transfer RNA biogenesis [BR:
sabi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PBT88_08660 (aspS)
Prokaryotic type
Other AARSs
PBT88_08660 (aspS)
Mitochondrial biogenesis [BR:
sabi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PBT88_08660 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
WBO24160
LinkDB
All DBs
Position
1775992..1777773
Genome browser
AA seq
593 aa
AA seq
DB search
MHAYRTHTCAQLSAGDVGQTVRLSGWVHRKRDHGGVLFVDLRDHYGLVQIVADSDSDALK
VLEGVRAESVVTIDGVVEARAPEAVNPNLATGAIEVRAKVVTILSAAAELPMPVAGEQEY
PEDVRLRYRFLDLRRETLHANIVTRTKIIRDMRRRMEDEGFTEYSTPILTASSPEGARDF
LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE
MSFVTQEDVWNTMEPVIAGVFETFAEDKPVTPAGSFPRIPYSEAMLKYGSDKPDLRNPIE
ITDVTEHFHGSGFGIFASLVEGGSVIRAIPAPGAGAGSRKFFDEMNNWARGEGYSGLGYI
NIKDGVPGGPIAKNHGEEATAKLIAALGLGPNDGVFFAAGKESVAAKLAGLARTRAAEQL
DLIDKDRFALCWIVDFPFYEWDEDEKKVEFAHNPFSMPQGGMEALETRDPLSLKAYQYDM
VCNGFEIASGSIRNQSPETMVKAFELVGLSKADVEERFGGLYRAFQYGAPPHGGMAAGVD
RIVMLLCGAQNLREITLFPMNQKAEDLLMGAPSPAMIKQLRELHVRVVEPQKG
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgcacccacacctgtgcccaactcagcgccggcgacgtcgggcagacc
gtccggctctccggctgggtgcatcgcaagcgcgatcatggcggcgtcctgttcgtcgat
ctgcgcgaccattatgggctcgtccagatcgtcgcggattcggatagcgatgcgttgaag
gtgctggagggcgtccgcgccgagagcgtcgtcaccatcgacggcgtggtcgaggcgcgc
gcgcccgaagcggtgaaccccaatctcgccaccggcgcgatcgaggtgcgggccaaggtc
gtcacgatcctgtcggccgccgccgaactgccgatgccggtcgccggcgagcaggaatat
cccgaggatgtgcggctgcgctaccgcttcctcgatctgcgccgcgagacgctgcacgcc
aacatcgtcacccgcaccaagatcatccgcgacatgcgccgccggatggaggacgagggc
ttcaccgaatattcgacgccgatcctcaccgcgtccagcccggaaggcgcgcgcgacttc
ctggtgccgagccgcatccatccgggcaaattctacgcgctgccgcaggcgccgcagcaa
tataagcagctgctgatggtcgccggcttcgaccgctatttccagatcgcgccctgcttc
cgcgacgaggatccgcgcgccgatcgcctacccggcgaattctaccagctcgatctcgag
atgagcttcgtcacccaggaagatgtgtggaacacgatggagccggtgatcgccggcgtg
ttcgagacgttcgccgaggacaagccggtgacgccggccggcagcttcccgcgcatcccc
tatagcgaggcgatgctgaaatatggctcggacaagcccgatctgcgcaatccgatcgag
atcaccgatgtcaccgagcatttccacggctcgggcttcggcatcttcgcctcgctggtc
gagggcggcagcgtgatccgcgcgatcccggcgccgggcgccggcgcgggcagccgcaaa
ttcttcgacgagatgaacaactgggcgcgcggcgagggctattcggggctcggctacatc
aacatcaaggatggcgtccccggcggcccgatcgccaagaaccatggcgaggaggcgacc
gccaagctgatcgccgcgctcggcctcggcccgaacgacggcgtgttcttcgccgccggc
aaggaatcggtggcggccaagctcgccggcctcgcccgcacccgcgccgccgagcagctc
gacctgatcgacaaggatcgcttcgctttgtgctggatcgtcgacttccccttctacgag
tgggacgaggacgagaagaaggtcgagttcgcgcacaaccccttctcgatgccgcagggc
ggcatggaggcgctggagacgcgcgacccgctgtcgctcaaggcctatcagtatgacatg
gtctgcaacggcttcgagatcgcctcgggttcgatccgcaaccagtcgccggagacgatg
gtcaaggcgttcgagctggtcgggctgtcgaaggccgacgtcgaggagcgcttcggcggc
ctctatcgcgccttccagtatggcgcgccgccgcatggcggcatggcggccggcgttgat
cgcatcgtgatgctgctgtgcggcgcgcagaatctgcgcgagatcacattgttcccgatg
aaccagaaggccgaggatctgctgatgggcgcaccgtcgccggcgatgatcaagcagttg
cgcgaactgcatgtccgcgtggtcgaaccccagaagggctga
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