Sphingomonas abietis: PBT88_08885
Help
Entry
PBT88_08885 CDS
T09690
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00550
Peptidoglycan biosynthesis
sabi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PBT88_08885
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sabi01002
]
PBT88_08885
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sabi01011
]
PBT88_08885
Enzymes [BR:
sabi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PBT88_08885
Peptidases and inhibitors [BR:
sabi01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PBT88_08885
Peptidoglycan biosynthesis and degradation proteins [BR:
sabi01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PBT88_08885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
WBO24198
UniProt:
A0ABY7NS45
LinkDB
All DBs
Position
1821184..1822383
Genome browser
AA seq
399 aa
AA seq
DB search
MKPVPTAVALLATVSLAATSSLAAVPPLETTAQVGFMQDMNSGAILFSKDPDRRMPPASL
AKMMTVYVAFSLIKSGDLKLDTKFTMSPETWKKWHGQGSTMFIAAGEQVSVADLLSGIIT
LSGNDACIVLAEGIAGTEPAFVNLMNQQRQRLGMTNSNFGTANGWPDNGVTYVTARDLAT
LAEATIRDYPDLYKQFYSKPNFAWGKTMGGTNISQDNRDPILGKVPGADGLKTGHTDEAG
YGFTGSAEQNGRRIVMVVAGFPSWGARASESISMMNWGFSSWRLKPLFAKGKRVDTAAVQ
GGSSSTVGLVAPSDLAVTVPLGMGGILGQKAGGDAPPMKVVYDGPIKAPIKAGQHIADLV
VSPPGQAPQTLALVAESDVGEAGFFGRIWASIKALFSWI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgtacccaccgccgtcgccctgctcgccaccgtatcgctggcggcgacgtcg
tcccttgccgccgtcccgccgctggaaaccacagcccaggtcggcttcatgcaggacatg
aattccggcgcgatcctgttcagcaaggatcccgatcggcggatgccgccggcgtcgctg
gccaagatgatgacggtctatgtcgcgttcagcctgatcaagagcggcgacctgaagctc
gacaccaagttcacgatgagcccggagacctggaagaaatggcatggccagggttcgacc
atgttcatcgccgccggcgagcaggtgtcggtcgcggacctgctgtccggcatcatcacg
ctgtcgggcaatgacgcctgcatcgtgctggccgagggcatcgccggcaccgagccggcc
ttcgtcaacctgatgaaccagcagcgccagcggctgggcatgaccaattctaatttcggc
accgccaatggctggccggacaatggcgtcacctacgtcaccgcgcgcgatctcgcgact
ttggccgaggcgacgatccgcgactatcccgatctctacaagcaattctattccaagccg
aatttcgcctggggcaagaccatgggcggaaccaacatcagccaggacaatcgcgatccg
atcctcggcaaggtgcccggcgccgatggcctgaagaccggccataccgacgaggccggc
tatggcttcaccggctccgccgagcagaatggccgccggatcgtgatggtcgtcgccggc
ttcccgagctggggcgcgcgcgccagcgaatccatctcgatgatgaactggggcttctcg
tcgtggcgcctcaagccgctgttcgccaagggcaagcgcgtcgacaccgcggcggtgcag
ggcggttcctcctccacggtcgggctcgtcgcgccgagcgatctggcggtaacggtgccg
ctcggcatgggcggcatcctcggccagaaggccggcggcgacgccccgccgatgaaggtg
gtgtatgacggcccgatcaaggcgccgatcaaggctggccagcacatcgccgatctcgtc
gtctcgccgccgggccaggcgccgcagacgctggcgctggtcgccgagagcgatgtcggc
gaggccggcttcttcggtcgcatctgggcgtcgatcaaggcgctgttcagctggatctga
DBGET
integrated database retrieval system
