Sphingomonas abietis: PBT88_09405
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Entry
PBT88_09405 CDS
T09690
Name
(GenBank) PAS domain S-box protein
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PBT88_09405
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sabi01001
]
PBT88_09405
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sabi02022
]
PBT88_09405
Enzymes [BR:
sabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PBT88_09405
Protein kinases [BR:
sabi01001
]
Histidine kinases
LuxR family [OT]
PBT88_09405
Two-component system [BR:
sabi02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
PBT88_09405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
HATPase_c
PAS_4
PAS_3
PAS_8
HisKA
Diguanyl_cycl_sensor
PAS_10
HATPase_c_5
PAS_7
HATPase_c_2
DUF3263
Motif
Other DBs
NCBI-ProteinID:
WBO24290
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Position
complement(1940888..1942540)
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AA seq
550 aa
AA seq
DB search
MDRDGTGSASEGEAGIVSGARLGGLSQYLARWRKGLAKERPIEGDVGLQAQVLAAELSLL
IDSAANYAIYMLDADGNVVIWNKGAERIKGWTEEEVIGRHCSIFYPEEEASAGKCADDLA
RAAAVGRIEEEGWRVRKDGSEFLASVTITAFRDEEGAVIGFGKVLRDITDERAAERSTEA
REAQLSSILATVPDAMVVIDDRGIVQSFSSAAERMFGYAEREVLGQNVRMLMPSPDLERH
DDYLRRYLATGEKKIIGKARRVIGLRKDGSTFPHELAIGEASGGGRRLFTGFIRDLTERE
FTQSQLSDLQAELIHVSRVSAMGAMASTLAHELNQPITAVANYVEASRDLLVDADPEAIA
MVREALGDAAAEAMRAGQIVRRLRDFVARGEVEKRIEDLPSLIEEACTLGLVGAAEKGVT
VALEIDPAASPVLVDRVQIQQVLINLLRNAVEAMVDSPVRQLRISSGLKSAQMVRVTVAD
TGPGLAPEIANELFRAFQSTKQEGMGLGLSICRTIVEAHGGRIWADSQAAAGTTFHFTLM
LAGGEDTLDG
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgacggtacaggcagcgcgtcggaaggcgaagcgggcatagtgtccggcgct
cggctcggaggtctgagccagtatcttgcccgctggcgcaagggactggccaaggaacgt
ccgatcgagggcgatgtcggccttcaggcgcaggtgctggcggcggagctgagcttgctc
atcgacagcgccgccaactacgccatctacatgctcgatgccgatggcaacgtcgtcatc
tggaacaagggtgcggagcgaatcaagggctggaccgaggaagaggtgatcggtcggcac
tgctcgatcttctatcccgaggaggaggcgtcagccgggaaatgcgcagacgatctggcc
cgcgcggccgccgtcggtcgaatcgaggaagaaggctggcgcgtccgcaaggacgggtcc
gaatttctcgccagcgtgacgatcacggccttccgcgacgaagagggggcggtgatcggc
ttcggcaaggtcctgcgcgacatcaccgacgagcgggctgccgagcgctcgaccgaggcg
cgcgaggcgcagctgagctcgattctggcgacggtgcccgacgcgatggtcgtcatcgac
gatcgcggcatcgtgcaatcgttcagcagcgcggccgagcgcatgttcggctatgcggaa
cgcgaggtgctcgggcagaacgtccgcatgctgatgccgtcacccgatctcgaacggcat
gacgattatctcaggcgctatctcgcgaccggcgagaaaaagatcatcggcaaggcccgg
cgcgtcatcgggctgcgcaaggacggctcgaccttcccgcacgagctcgcgatcggcgag
gcaagcgggggcggcaggcgcctattcaccggcttcatccgcgatctcaccgagcgcgaa
ttcacgcagtcacagcttagcgaccttcaggcggagctgatccacgtctctcgcgtcagc
gcgatgggggccatggcctcgacgctcgcacacgagctgaaccagccgatcaccgcggtc
gccaattatgtcgaggcaagccgcgacttgcttgtcgatgcggaccctgaagcgattgcg
atggtgcgcgaggcgctcggcgatgccgcggccgaggcgatgcgggccgggcagatcgtc
cggcgactgcgcgacttcgttgcccgcggcgaggtcgagaaacggatcgaggacttgccg
agcctgatcgaggaggcttgcacgctcggcttggtgggtgccgccgagaagggggtcacg
gttgccctggagatcgaccctgcggcctcgccggtgttggtcgaccgcgtgcagatccag
caggtgctgatcaatctgctgcgcaacgcagtcgaggcgatggtcgacagcccggtgcga
cagcttcggatctcgtccgggctcaaatccgcgcagatggtgcgggtcaccgtcgccgat
accggtcccggccttgcccccgaaatcgcaaacgaactcttccgcgcgttccagagcacc
aagcaggaagggatggggctcggcctctcgatctgccgaaccattgtcgaggcgcatggc
ggccgcatctgggcggactcgcaggcggcggcggggacgacgttccatttcaccctcatg
cttgccggaggagaagacacccttgacggatag
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