Sphingomonas abietis: PBT88_10315
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Entry
PBT88_10315 CDS
T09690
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
sabi
Sphingomonas abietis
Pathway
sabi02010
ABC transporters
sabi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PBT88_10315
03070 Bacterial secretion system
PBT88_10315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sabi02000
]
PBT88_10315
02044 Secretion system [BR:
sabi02044
]
PBT88_10315
Transporters [BR:
sabi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PBT88_10315
Secretion system [BR:
sabi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PBT88_10315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
ABC_ATPase
DUF87
AAA_29
SbcC_Walker_B
AAA_22
MeaB
AAA_18
AAA_30
Zeta_toxin
AAA_21
RsgA_GTPase
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
WBO24457
LinkDB
All DBs
Position
2144731..2146881
Genome browser
AA seq
716 aa
AA seq
DB search
MSEADSHRVDENSESGLDAFATLLAMHRIAVDPAQLRHGLGHHQAVSPRDIVRIAQGLDG
VRARSRNARWKDLERMPLPALANGRLGWFLIGRVAGEEILIQRPDRTIGKLTRAELDEVW
SGELVLVTTRENVGLTHQAFDFTWFIPQIVRYRSLIGEVLLITLALNLLGLAAPLFFQNV
VDKVLVHDTMSTLTVLAIGFVGVSTWETVFGWLRTKLYSETSQKLDVELGAKLFRHLLHL
PLSYFEARRVGDTAMRVRQLETIREFLTNASLSVLVDPAFTIVFLVAMWIYSTKLFVISV
LTIPAYIAVAVLITRPLRARVNEKFERSAANNALLVESIGGIQTVKASAVEPQWQDRWER
QLAGYSEASQRVISLGNTGSQAIQYISKLNMAAILYFGAQAVIAHKMTVGGLIAFNMFAQ
RVSGPVIRMAQLWQDFQQVKIAIERLGDVLNQPTEPGAGSRTALPAIKGEIRFESIKFRY
DLEGPWTLEDIDLDIAAGSTLGIVGSSGSGKSTLTKLLQRLYTPAGGRVLVDGVDVGQID
PAWLRRQIGVVLQENLLFNRSVRENIALANPAMPLEAVNAAATLAGAHEFIVRMPQGYDT
IIEERGANLSGGQRQRLAIARALVTQPRILIFDEATSALDAESEEIIQANLKAMAQGRTV
LIIAHRLSAIRQCDRIITLEKGRIVETGSHDELLRLDGRYADLHRRQMGVTHGVAA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggccgattcccatcgtgtggacgaaaacagcgaaagcggcctcgatgcgttc
gcgaccttgctcgccatgcaccgcatcgccgtcgatccggcccagctgcgccatggcctt
ggtcatcatcaggcggtcagtccgcgagacatcgtccggatcgcgcaggggctggacggc
gtgcgtgcccggtcacgcaacgcacgctggaaggatctcgaacggatgccgttgccggcg
cttgccaacggcaggctcggctggttcctgatcgggcgcgtcgccggcgaggagattctg
atccagcgccccgaccgcacgatcggcaagctgacgcgcgcggagctggacgaggtctgg
tcgggcgaactggtattggtcaccacgcgcgagaatgtcggcctgacacatcaggcattc
gattttacctggttcatccctcaaatcgtgcgctaccgcagcctgatcggcgaggtgctg
ctgatcacgttggcactgaacctgctggggcttgcggcgccgctctttttccagaacgtc
gtcgacaaggtgctggtccacgacaccatgtcgacattgaccgtgctcgccatcggcttc
gtcggcgtgtcgacctgggagaccgtgtttggttggctcaggaccaagctctattccgag
accagccagaaactcgatgtcgaactgggcgccaagctgttccgccatctgctgcacctg
ccgctcagctatttcgaggcgcggcgtgtcggcgataccgcgatgcgggtgcgccagctc
gaaacgatccgcgaatttctgaccaacgcgtcgctgtcagtgctggtcgacccggccttc
accatcgtcttcctggtcgcgatgtggatctactcgaccaagctgttcgtcatctcggtg
ctgacaatccccgcctatatcgccgtcgcggtgctgatcacccggccgctgcgcgcgcgg
gtgaacgagaagttcgagcgcagtgccgccaacaacgcgctgctggtcgaaagcatcggc
ggcatccagacggtgaaagccagtgcggtcgagccgcaatggcaagatcgctgggagcgc
cagctggccggctatagcgaggcgagccagcgggtgatcagccttggcaacacgggcagc
caagcgatccaatatatctccaagctcaacatggcggcgatcctctatttcggggcgcag
gccgtaatcgcgcacaagatgacggtgggtggcctcatcgccttcaacatgttcgcgcag
cgcgtgtcggggccggtgatccggatggcgcagctctggcaggattttcaacaggtcaag
atcgcgatcgagcggctgggcgacgtgctcaaccagcccaccgagcccggcgcggggagc
cgtaccgcgctgcccgcgatcaagggtgaaatccgcttcgaaagcatcaagttccgctac
gacctcgaaggtccctggacgcttgaggatatcgacctcgatattgccgccgggtcgaca
ctgggcattgtcggttcgtcgggctcgggtaagtcgaccctgaccaagctcctccagcgg
ctctatacgccggctggcggacgcgtgctcgtcgacggtgtcgacgtcgggcagatcgat
ccggcctggctgcgccgccagatcggcgtggtgctccaggagaacctgctcttcaatcgt
tcggtgcgggagaatatcgcgctcgccaatccggcgatgccgctggaggcggtcaatgcc
gcggcgacgctggccggcgcgcacgaattcatcgtgcggatgccgcagggctatgacacg
atcatcgaggagcgtggcgccaacctgtcgggcggccagcgccagcgcctcgccatcgcc
cgcgcgctagtcacgcaaccgcgcatcctgatcttcgacgaggcgacctcggcgctcgat
gcggagagcgaggagatcatccaggccaatctcaaggcgatggcgcaaggccgcaccgtg
ctgatcatcgcgcatcgtctgtcggcgatccggcaatgcgaccggatcatcacgctggag
aagggccggatcgtcgagaccggcagtcatgacgagctgctgcgcctagacggccgctat
gccgatcttcaccgccgccagatgggcgtcacgcacggagttgccgcatga
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