Sphingomonas abietis: PBT88_12180
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Entry
PBT88_12180 CDS
T09690
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PBT88_12180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sabi03400
]
PBT88_12180
Enzymes [BR:
sabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PBT88_12180
DNA repair and recombination proteins [BR:
sabi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PBT88_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
PIF1
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
WBO20963
UniProt:
A0ABY7NHG0
LinkDB
All DBs
Position
2566041..2568209
Genome browser
AA seq
722 aa
AA seq
DB search
MSRARVLLLNSALGPLDYRVPHGMTVEPGSIVLAPLGPRQIAGVVWEAEHMPSDAEVGDN
RLRNLAAAYDLPPIAAPLRRLIEWTAGYYLAPPAAVLRMALSSASALDGGRTVIEYRATG
LAPDRLTPQRTQALERIGERQGLIRELAAIADVTDAVMRGLVKAGAIEAVEVAVDAPYAE
PDPGFAPPALSADQRAVSDTIVAAVQAKSFDPMLLDGVTGSGKTEVYFEGIAAALREGRQ
SLVLLPEIALTEPFLKRFEARFGHLPVAWHSDLRQSQRRRAWRAIASGEAKVVCGARSAL
FLPYRDLGLIVVDEAHETSFKQEEGVMYHARDVAVMRGRFERIPVVLASATPAIETRQMV
EIGKYRELKLPGRYGVAQMPKIDIIDLTQDPPPKQRWIAPTLVSALHETIERGEQALLFL
NRRGYAPLTLCRTCGHRFRCPNCTAWMVEHRLTARLACHHCGHVMPPPAACPECHEEDSL
VACGPGVERIADEVAAILPDARTAIVTSDTMWSPAKAAEFVNRMEAGDIDVVIGTQLITK
GYHFPNLTLVGVVDADLGLQGGDLRAAERSFQQIAQVAGRAGRGAKPGRVYLQTREPGAP
VIQALVTGDAESFYAAETESRREAGAPPFGRYAAIIVSSEKLDEAVDTARLIGHHAPEVE
GMMVFGPAPAPLAMLRGRHRQRLLVHARRALDVQDVIRGWLGALEWPRGVRVAVDVDPYS
FL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcccgagtcctcctgctcaacagcgcgctggggccgctcgattaccgcgtg
ccgcacggcatgacggtcgagcccggatcgatcgtgctcgccccgctcgggccgcgccag
atcgccggcgtggtgtgggaggccgagcatatgccgtccgatgccgaggtcggcgacaac
cggctgcgcaacctcgccgccgcctacgatctcccgccgatcgcggcaccgctgcgccgg
ctgatcgagtggaccgccggctattatctggccccgcctgccgccgtgctgcgcatggcg
ctgtcgtcggcgagcgcgctcgatggcgggcgcacggtgatcgaatatcgcgcgaccggc
ctggccccggatcgcctgacaccgcagcggacccaggcgctggagcggatcggcgagcgg
caggggctgatccgcgaactggccgccatcgccgatgtcacggacgcggtgatgcggggg
ctggtcaaggccggcgcgatcgaggccgtcgaggtggcggtcgatgcgccttatgccgaa
cccgatcccggcttcgcgccgcctgctctgtccgccgatcagcgcgccgtgtccgacacc
atcgtcgcggcggtgcaggcgaagagcttcgatccgatgctgctcgacggcgtcaccgga
tcgggcaagaccgaggtctatttcgagggcatcgccgccgcgctgcgggaggggcgccag
tcgctcgtcctgctgcccgagatcgcgctgaccgagccgttcctcaagcgcttcgaggcg
cgtttcggccatctccccgtggcctggcattcggacctgcgccagtcccagcggcggcgc
gcgtggcgggcgatcgccagcggcgaagccaaggtggtgtgcggggcgcgctccgctcta
ttcctgccctatcgcgatctcggcctgatcgtggtcgacgaggcgcacgagaccagcttc
aagcaggaggagggcgtgatgtaccacgcccgcgatgtggcggtgatgcgcggccgtttc
gagcgcataccggtcgtcctcgcctcggccacgccggcgatcgagacccgccagatggtc
gagatcggcaaatatcgcgaattgaagctgcccggccgctacggtgtcgcccagatgccg
aagatcgacatcatcgatctgacccaggatccgccccccaagcagcgctggatcgccccc
actctggtctccgcgctgcacgagacgatcgagcgcggcgagcaggcgctgctgttcctc
aaccggcgcggttacgccccgctgaccctgtgccggacctgcggccaccgcttccgctgc
ccgaactgcaccgcctggatggtcgagcaccggctgaccgcgcggctcgcctgccatcat
tgcggccatgtcatgccgccgcccgccgcctgccccgaatgccatgaggaggacagcctc
gtcgcctgcggccccggcgtcgagcggatcgccgacgaggtggcggcgatcctgcccgat
gcccgcaccgcgatcgtcacctcggacacgatgtggtcgccggccaaggcggccgagttc
gtcaaccggatggaagccggcgatatcgacgtggtgatcggcacccagctgatcaccaag
ggctatcatttccccaacctgactttggtcggcgtcgtggatgccgatctcggcctgcag
ggcggcgacctgcgcgccgccgagcgcagcttccagcagatcgcgcaggtcgccgggcgc
gccggacgcggcgccaagccgggccgcgtctatctccagacccgcgagcccggtgcgccc
gtcatccaggcgctggtgaccggcgatgcggagagcttctacgcggccgaaaccgagagc
cggcgcgaggccggcgcgccgcccttcggccgttatgccgcgatcatcgtctcctccgag
aagctggacgaggcggtcgatacggcgcggctgatcgggcaccacgcgcccgaggtggag
gggatgatggtgttcggccccgcccccgccccgctcgccatgctgcgcggccgccaccgc
cagcggctgctcgtccatgcccgccgcgcgctcgacgtgcaggacgtgatccggggctgg
ctcggcgcgctcgaatggccgagaggggtgcgcgtcgcggtggacgtggacccatacagc
ttcctgtaa
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