Sphingomonas abietis: PBT88_12525
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Entry
PBT88_12525 CDS
T09690
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sabi
Sphingomonas abietis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sabi02000
]
PBT88_12525
Transporters [BR:
sabi02000
]
Other transporters
Pores ion channels [TC:
1
]
PBT88_12525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WBO21029
LinkDB
All DBs
Position
complement(2641055..2643055)
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AA seq
666 aa
AA seq
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MRTLFLLGVASAALIPAAVSAQQAPVAAPTKAQDIIVTASPFVSDGSDTPTIAAKVDRET
ILQNGGASIADALAQVPGIAATTFASGASRPIIRGMDATRVRILEDGSSSSDVSDIGPDH
GVPIDPLSAQSIEVVRGAGTLRYGSQAIGGVVNVLNNRVPMTLPTRPLSAEMDGSFDTVS
NTGQGSLMADGQVGDLAVHVDGFYRHADDYDTPLGTQQNSFFHGYGETVGTSYFFGPGKT
SHVGIAIMDYDAQYGIPSDTTYIDMHQTKLLTRDSFDLGSGLFRTLTFDGSYAKYQHSEK
EPDGSVDSTFRNREYDGHAELLLGPIGFLQNTALGAEVQHRTFSALGEDSSYLFPTLTKS
EAGYIFTEAPITAALKIQASGRIEHVSVKGTPRSDVPTRDNFTPASGSIGALLDVNKAVK
LGLTFSSTGRAPAQTELFARGGHDGPDTFETGDPNLKIERANSLEGTIRVNTGGFRFEGS
VYSTWFHNYIYGELTGRTCDDDGDCVVGDGDDLKELNYRQQGAHFRGLEGQASYALVKTA
SGGTLEAKAIGDYTRATLNHDGNVPRIPPYRVGGGLSWESKPVDAGFLFTYYGRQNRFGA
FDTATPSYVELDANLAWRPLEQHPGLELAIVGHNLTNDIQRNAASLNKDDVVLPGRNVRF
VVKLAI
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccctcttcctgctgggcgtggcctccgccgcgctcatccctgccgccgtgtcc
gcgcagcaggcccctgtcgctgccccgacgaaggcgcaggatatcatcgtcaccgcctcg
cccttcgtctccgacggcagcgatacgccgaccatcgccgccaaggtcgatcgcgagacg
atcctgcagaatggcggcgccagcatcgccgacgcgctcgcccaggtgcccggcattgcg
gcgacgacctttgcctccggcgccagccgcccgatcatccgcggcatggacgccacccgc
gtccgcatcctggaggatggctcgagcagctcggacgtgtcggacatcggccccgatcac
ggcgtcccgatcgatccgctgtccgcgcagagcatcgaggtggtgcgcggcgccggcacg
ctgcgctatggcagccaggcgatcggcggcgtcgtcaacgtgctcaacaaccgcgtgccg
atgaccctgccgaccaggccgctgtcggccgagatggacggcagcttcgataccgtctcc
aacaccgggcagggctcgctgatggcggacgggcaggtcggcgatctcgccgtgcatgtc
gacggcttctaccgccatgccgacgattatgacacgccgctcggcacccagcagaacagc
ttcttccatggctatggcgagacggtcggcacctcctatttcttcggcccgggcaagacg
agccatgtcggcatcgcgatcatggattatgacgcgcaatacggcatccccagcgacacc
acctatatcgacatgcaccagaccaagctgctgacccgcgacagcttcgatctcggaagc
ggcctgttccgaacgctgaccttcgacggcagctatgccaaatatcagcatagcgaaaag
gaacccgacggcagcgtcgacagcaccttccgcaaccgcgaatatgacggccatgccgaa
ttgctgctcggcccgatcggcttcctgcaaaacacggcgctcggtgccgaggtccagcat
cgcacattctccgcgctgggcgaggacagctcctatcttttcccgaccctgaccaaatcg
gaggccggctatatcttcaccgaggcgccgatcactgcggcgctgaagatccaggcgagc
ggccgtatcgagcatgtcagcgtcaagggcacgccgcgctccgacgtccccaccagggac
aatttcacgccggcgagcggatcgatcggcgcgctgctcgacgtcaacaaggcggtgaag
ctcggcctgaccttctccagcaccggccgcgccccggcgcagaccgaattgttcgcgcgc
ggcggccatgacggccccgacaccttcgagaccggcgatcccaacctcaagatcgagcgc
gccaactcgctggaagggacgatccgcgtcaacaccggcggcttccgcttcgagggcagc
gtctacagcacctggttccacaactatatctatggcgaactcaccggccgcacctgcgac
gatgacggcgattgcgtggtcggcgatggcgacgatctgaaggagctcaactatcgccag
cagggcgcgcatttccgcggcctcgaagggcaggcctcctatgcgctggtcaagaccgcg
tcgggcggcacgctggaggccaaggcgatcggcgactatacccgcgccacgctgaaccat
gacggcaatgtgccgcgcatcccgccctatcgcgtcggcggcggcctgtcgtgggagagc
aagccggtcgatgccggcttcctgttcacttattatgggcggcagaaccgcttcggcgcc
tttgacaccgcgacgcccagctatgtcgagctggatgcgaacctcgcctggcggccgctt
gagcagcatccgggcctcgaactggcgatcgtcggccataatctgaccaacgacatccag
cgcaacgcggcctcgctcaacaaggacgacgtggtgctgcccggccgcaatgtccgcttc
gtggtgaagctcgcgatataa
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