Sphingomonas abietis: PBT88_12900
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Entry
PBT88_12900 CDS
T09690
Symbol
hemN
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00860
Porphyrin metabolism
sabi01100
Metabolic pathways
sabi01110
Biosynthesis of secondary metabolites
sabi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PBT88_12900 (hemN)
Enzymes [BR:
sabi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
PBT88_12900 (hemN)
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Paralog
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
WBO24632
UniProt:
A0ABY7NU05
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All DBs
Position
complement(2716860..2718203)
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AA seq
447 aa
AA seq
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MQRYIPDLASRSVPRYTSYPTAAEFRGDVGAAQQRDAIAAIAPGSPVSLYVHIPYCRQIC
WYCGCNTGPVGRGQRLTAYLAALEAEIAAVAPLLRGQVVTIHFGGGSPNALPPAGFAALV
ATLRANFGGAATATIAVELDPRDMDRAYAEALAAAGVTRVSLGVQTFAPRVQALINRIQP
YEAVAQVVADLRAAGIAEINFDLMYGLPGQTLRDIGETLDLALGLSPSRVAMFGYAHMPR
LLGRQRMIDTAALPDAAARFTQSVLAFDRLGQAGYVAIGFDHFARPTDSIAIAAEAGHLR
RNFQGFTDEPADAIIGLGASAISQFDGLLVQNEKHVGDYRDLVGAGGLAGVRGIVRTADD
QLRGTIIERLLCDGTVDVAAVAIAHGAKPCAFASALPALQQFGRLGVATLSGWRVSVPPD
ARAYARLVASAFDIYRQPDRQRFSQAI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgctatattcccgatctcgcgagccgctccgtaccgcgctataccagctatccc
acggcggcggagttcaggggcgatgtcggcgccgcgcagcagcgcgacgcgatcgcggcg
atcgcgcccggatcgccggtctcgctctacgtccacatcccctattgccgccagatctgc
tggtattgcggctgcaacaccggcccggtcgggcgcgggcagcggctgaccgcctatctc
gccgcgctggaggcggagatcgcggccgtcgcgccgctgttgcgcgggcaggtcgtcacc
atccatttcggcgggggcagccccaatgcgctgccgccggcgggctttgcggcattggtc
gctacgcttcgggcgaacttcggtggagcggccaccgcgacgatcgcggtcgagctcgac
ccgcgcgacatggaccgggcctatgcggaggccctggcggcggccggcgtcacccgcgtc
agcctcggcgtgcagaccttcgcgccgcgcgtgcaggcgctgatcaaccgcatccagcct
tatgaggcggtggcgcaggtggtggccgatctgcgcgcggccggcatcgccgagatcaac
ttcgatctgatgtacggcctgcccggccagaccctgcgcgacatcggggagacgctggac
ctcgcgctcggcctctcccccagccgtgtcgcgatgttcggctatgcgcatatgccacgc
ctgctcggccgccagcggatgatcgacaccgccgcgctacccgatgcggcggcgcgcttc
acccagagcgtgctggcattcgatcggctcgggcaggccggctatgtcgcgatcggcttc
gatcatttcgcgcggccgacggacagcatcgccattgccgccgaagccgggcatttgcgc
cgcaatttccagggcttcaccgatgaaccggccgatgcgatcatcggcctcggtgcatcc
gcgatcagccagttcgacggcctgctggtgcagaatgagaagcatgtcggcgattatcgc
gatctcgtcggtgccggtggcttggccggggtgcgcggcatcgtgcgcaccgccgacgat
cagctgcgcggcacgatcatcgagcggctgctgtgcgacgggacggtcgacgtcgccgcg
gtcgcgatagcgcatggcgcgaagccctgcgccttcgccagcgcgttgcccgcgctccag
caattcggccggctcggcgtcgcgacgctgtcgggctggcgggtgagcgtgccgcccgat
gcgcgggcctatgcgcggctcgtcgccagcgccttcgacatctatcggcagccggatcgg
cagcgtttcagccaggcaatataa
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