Sphingomonas abietis: PBT88_12950
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Entry
PBT88_12950 CDS
T09690
Name
(GenBank) NAD(P)-binding protein
KO
K00316
spermidine dehydrogenase [EC:
1.5.99.6
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00330
Arginine and proline metabolism
sabi00410
beta-Alanine metabolism
sabi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PBT88_12950
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PBT88_12950
Enzymes [BR:
sabi01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.99 With unknown physiological acceptors
1.5.99.6 spermidine dehydrogenase
PBT88_12950
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Motif
Pfam:
NAD_binding_8
DAO
Thi4
FAD_binding_2
FAD_oxidored
MCRA
Pyr_redox_2
Lycopene_cycl
NAD_binding_9
HI0933_like
Pyr_redox
Mqo
Motif
Other DBs
NCBI-ProteinID:
WBO21107
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All DBs
Position
2728124..2730052
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AA seq
642 aa
AA seq
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MRATVRDGGRYARNDHPADFVNGVAVGTAGITAAGLAPGGASAIAGTGTASAGGIAATYP
PLHTGMRGSHPGAFEQAHVLRDGGHPGRGEPVDTGERYDLVVVGGGISGLAAAHFFREAK
PGARILILENHDDFGGHAKRNEFRPAGSPTLLCNGGTLGIDSPRPYSPQADGLLKAIGLD
VEAMKGIEKEGAYRSRGLGHAVFFDKATFGADYLATGADHRPWPEVLAKAPLSDKAKADI
AAIESGGADWMPGMTSAEKKDRLSRISYKAYLADYAKADPAALAYFQPRSQGWWGVGIDG
ITALDAWGMNFPGFAGLKLDKGSIPRMGYTPMGYADTGGSYALHFPDGNATIARLLVRAL
IPEALPGRDAADSVLAQADYSQLDRPGQPVRIRLSSIALAVHHVGDPETAKAVAITYVTG
MDLKTVHAARVVMASWNMMIPYIVPELPDAQQAALHDLVKAPLVYTSVELANRQAFEALK
ISRVYAPGCFFTDYGLNEVVDVGGYATPRDPSMPTVVRMEHIPCEPGLPEFDQNRVGRMA
LLQTPFETFERHVRAEMGAALAGGGFDPDRDITGITVNRWPHGYAPEFNPLWEPVLPEDE
QPHVVARKRFGRIAIANADSGRAAYTSSAIDQAHRAIGELLS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggcgacagtccgggatgggggcagatatgcgcggaacgatcacccggcggacttc
gtcaacggcgtcgcggtcggcacggcagggatcacggcggcgggcctggcgccgggcggc
gcgtccgccatcgccggcaccgggacggcatcggcgggcgggatcgccgccacctatccg
ccgctgcacaccgggatgcggggatcgcatcccggcgcgttcgagcaggcccatgtgctg
cgcgacggcggccatcccggccggggcgagccggtcgataccggcgagcgctacgatctg
gttgtcgtcggcggcgggatcagcggactggcggcggcgcatttcttccgcgaggccaag
cccggcgcccgcatcctgatcctcgaaaaccatgacgatttcggcggccacgccaagcgc
aacgagttccgcccggccggttcgccgactttgctctgcaatggcggcacgctcggcatc
gacagcccccgcccctacagcccgcaagccgatgggctgctcaaggcgatcgggctggac
gtcgaggcgatgaaggggatcgagaaggagggcgcttacaggtcgcgcgggctcggccac
gccgtcttcttcgacaaggcgaccttcggcgccgactatctggcgaccggcgccgaccac
aggccatggcccgaagtgctcgccaaggcgccgctgtcggacaaggccaaggccgacatc
gccgcgatcgaaagcggcggggcggactggatgccgggcatgacctcggccgagaagaag
gaccggctcagccgcatctcctacaaggcctatctcgccgattatgcgaaggccgatccg
gcggcgctggcctatttccagccgcgatcgcagggctggtggggggtcggcatcgacggc
atcaccgcgctggatgcgtggggcatgaacttccccggcttcgccgggctgaagctcgac
aagggcagcatcccgcgcatgggctataccccgatgggctatgccgacaccggcggcagc
tacgcgctccatttccccgatggcaacgccaccatcgcgcggctgctcgtccgcgcgctg
attcccgaggcgctgcccggccgggacgccgccgacagcgtgctggcgcaggccgattac
agccagctcgatcggcccggccagccggtgcgcatccgcctctcctcgatcgcgctcgcc
gtccaccatgtcggagatcccgagaccgccaaggcggtggcgatcacctacgtcaccggc
atggacctgaagaccgtccacgcggcgcgcgtggtgatggcctcgtggaacatgatgatc
ccctatatcgtgccggaactgcccgacgcgcagcaggcggcgctgcacgatctggtcaag
gcgcctctggtctacacctcggtcgagttggccaatcggcaggcgttcgaggcgctcaag
atctcgcgcgtctatgcgccgggctgcttcttcaccgattacgggctcaacgaggtggtc
gatgtcggcggctatgcgacgccgcgcgatccgtccatgccgacggtggtgcggatggag
catatcccatgcgagcccggccttcccgaattcgaccagaaccgcgtcggccgcatggcc
ctgctccagaccccgttcgagaccttcgaacggcatgtccgcgccgagatgggcgccgcg
ctggccggcggcggcttcgatcccgatcgcgacatcaccggcatcaccgtcaaccgctgg
ccgcacggctatgcgccggaattcaacccgctgtgggagccggtgctgcctgaggacgag
cagccccatgtcgtcgcccggaaaagattcggccgcatcgcgatcgccaatgcggattcc
ggtcgcgccgcttatacaagcagcgcaatcgaccaggcgcaccgcgccatcggggagcta
ttgagctga
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