Sphingomonas abietis: PBT88_13635
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Entry
PBT88_13635 CDS
T09690
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sabi
Sphingomonas abietis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sabi03400
]
PBT88_13635 (radA)
DNA repair and recombination proteins [BR:
sabi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PBT88_13635 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_16
AAA_22
AAA_30
Lon_C
RecA
AAA
nSTAND3
NTPase_1
DUF7125
Glyco_hydro2_C5
AAA_29
NACHT
MeaB
AAA_24
AAA_5
Rad51
DAP3
SLFN-g3_helicase
NPHP3_N
AAA_14
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
WBO21233
LinkDB
All DBs
Position
2864530..2865903
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AA seq
457 aa
AA seq
DB search
MAKITKRFVCQACGGVATRWQGQCADCAEWNTLVEEAPVVASAFAAKHDLRRGGRAVELV
GLDAEIVLPERMMSGIAELDRTLGGGFVAGSATLIAGDPGIGKSTLLIQAAAKLATAGMA
VAYISGEEAADQVRLRARRLGLGSAPVKLASATSVRDILATLDIGTPPALLVIDSIQTMH
SDTIEGAPGTVSQVRASAQELIRYAKETGCALILVGHVTKDGAIAGPRVLEHMVDTVLSF
EGERSHQYRILRAIKNRFGGTDEIGVFAMDDKGLGEVANPSSLFLTQRDADVAGAVVFPA
LEGTRPLLVEIQALTVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFSTSEVYLNV
AGGYRITDPAADLAVAAALVSALAERPVPADAVAFGEVALSGELRPVAHGAIRLRESAKL
GFERALVPSTGTIEAGSIAPSRFPTLGRLVDHLLGRG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcaccaagcgcttcgtgtgtcaggcgtgcggcggcgtggcgacgcgctgg
caggggcagtgcgccgattgcgcggaatggaacacgctggtcgaggaggcgccggtcgtc
gccagcgccttcgccgccaagcacgacctgcggcgcggcgggcgcgcggtcgagctggtc
gggctcgatgccgagatcgtgctgcccgagcggatgatgagcggcatcgccgagctggat
cgcacgctcggcggcggcttcgtggcgggatcggccacgctgatcgcgggcgatcccggc
atcggcaaatcgacgttgctgatccaggccgccgccaagctcgccaccgccgggatggcg
gtcgcctatatctcgggcgaggaggcggccgaccaggtgcggttgcgggcccggcggctg
gggctcggcagcgcgccggtgaagctcgcctcggccacctcggtgcgcgacatcctcgcc
acgctcgatatcgggacgccgcctgccctgctggtgatcgactcgatccagaccatgcat
tcggacacgatcgagggcgcgcccggcacggtcagccaggtccgcgcctcggcgcaggag
ctgatccgctacgccaaggagaccggctgcgcgctgatcctggtcggccacgtcaccaag
gacggcgcgatcgccgggccgcgcgtgctcgaacatatggtcgatacggtgctgagcttc
gagggcgagcgcagccatcaatatcgcatcctgcgggcgatcaagaaccgcttcggcggc
accgacgagatcggcgtgttcgcgatggacgacaagggcttgggcgaggtcgccaacccc
tcctcgctgttcctcacccagcgcgatgccgacgtcgccggcgcggtggtgttcccggcg
ctggagggcacgcggccgctgctcgtcgagatccaggcgctgaccgtgcggctcgcctcg
ggcgcgaccccgcgccgcgccgtcgtcggctgggattcggggcggctggcgatgatcctc
gcggtgctggaggcgcgctgcgggctgagcttctcgacctccgaagtctatctcaacgtc
gcgggcggctatcgcatcaccgatcccgccgccgatctcgcggtggcggcggcgcttgtc
tcggcgctggccgagcgcccggtgccggccgacgcggtggcgttcggcgaggtcgcgttg
tcgggcgagctgcgcccggtcgcccatggcgccataaggctgcgcgaatcggccaagctc
ggcttcgagcgcgcgctggtgccgagcaccggcacgatcgaggccggcagcatcgcgccg
agccgcttcccgaccctcggccggctggtcgatcatctgctcgggcgcggatga
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