Sphingomonas abietis: PBT88_13640
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Entry
PBT88_13640 CDS
T09690
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi03420
Nucleotide excision repair
sabi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PBT88_13640
03430 Mismatch repair
PBT88_13640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sabi03400
]
PBT88_13640
Enzymes [BR:
sabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PBT88_13640
DNA repair and recombination proteins [BR:
sabi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PBT88_13640
MMR (mismatch excision repair)
Other MMR factors
PBT88_13640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
WBO21234
LinkDB
All DBs
Position
2866155..2868467
Genome browser
AA seq
770 aa
AA seq
DB search
MTHLVPTSAGPAFPEPAYIAGLNEPQRDAVLTTEGPVLVLAGAGTGKTAALTARLAHLIA
TRKAWPSEILAVTFTNKAAREMRERVGRIMGAGAEGGVEGLPWLGTFHSVAAKMLRRHAE
LVGLQSNFTILDTDDQLRLLKQLIVAADLDEKRWPARQLAGLIDRWKNRGWVPADVDAGE
SEAYANGRGAELYAAYQARLKAVNACDFGDLLLHMLVILKTHRDVLEGYQQRFRYIMVDE
YQDTNSSQYLWLRLLAQARKNICCVGDDDQSIYSWRGAEVANILRFEHDFPGAKTIRLEQ
NYRSTPHILAAASEVIANNGQRLGKTLWTALEAGEKINVVGVWDGPEEARRVGDEIDAHR
RNGGSYDDVAILVRAQHQTREFEDRFIAIGLPYRIVGGFRFYERAEIRDALAYLRAVHQP
ADDLAFERIVNTPKRGLGDKAVANIHLLARAEGIPLMLAAARLCDTDELTGAARKSLGRL
VGDIARWRDLSNSLAHPELCRQILDESGYTAMLQADRSTESAGRLENLTELARAMEEYET
LGAFLEHVSLVMDNEGNDGGAKVTIMTVHAAKGLEFDTVFLVGWEEGLFPSQRALDEGGT
KSLEEERRLAYVAITRARRRCVIIHAANRRIYGQWTSSIPSRFVGELPDEHIEAETTMSG
GESLWRAQWSERADPFAHLERGTGRGPGWQRAAALGEPAARSGHGGRILEVKASAASYAA
KPRSDVAIGQRVFHTKFGYGTVEGIEGNKLAIAFEQSGTKHVLDSFVTPA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaccttgtacccacttccgccggcccggcctttcccgagccggcctatatcgcc
gggctgaacgagccccagcgcgacgccgtgctcaccaccgaaggcccggtgctggtgctg
gccggcgccggcaccggcaagaccgcggcgctgaccgcgcggctcgcccatctgatcgcg
acgcgcaaggcatggccgagcgagatcctcgccgtcaccttcaccaacaaggcggcgcgc
gagatgcgcgagcgggtcggccggatcatgggtgccggagccgaggggggcgtcgagggg
ctgccctggctcggcaccttccactcggtcgccgccaagatgctgcgccgccatgccgag
ctggtcgggctgcagagcaacttcaccatcctcgataccgacgaccagctgcgcctgctc
aagcagttgatcgtggcggccgatctcgacgagaagcgctggcccgcgcgccagctcgcc
gggctgatcgatcgctggaagaatcgcggctgggtgccggccgacgtcgatgccggggag
agcgaggcctatgcgaacggccgaggcgccgaactctacgccgcctatcaggcccggctg
aaggcggtgaacgcctgcgatttcggcgatctgctgctgcacatgctggtgatcctgaag
acccatcgcgacgtgctggaaggctatcagcagcgctttcgctacatcatggtggacgag
tatcaggataccaactcgtcgcaatatctctggctcaggctgctcgcgcaggcgcgcaag
aacatctgctgcgtcggcgacgacgaccagtcgatctattcgtggcgcggcgccgaagtg
gccaacatcctgcgcttcgagcatgattttcccggcgccaagacgatccggctggagcag
aattaccgctccaccccgcatatcctcgccgccgccagcgaggtgatcgccaataacggc
cagcggctgggcaagaccctgtggacggcgctcgaagcgggtgagaagatcaatgtcgtc
ggcgtgtgggacggccccgaggaggcgcgccgcgtcggtgacgagatcgatgcgcaccgc
cgcaacggcggcagctacgacgatgtcgcgatcctcgtccgcgcccagcaccagacccgc
gagttcgaggaccgtttcatcgcgatcggcctgccctatcgcatcgtcggcggcttccgc
ttctacgagcgcgccgagatccgcgatgcgctggcttatctgcgcgccgtccaccagccg
gccgacgatctcgccttcgagcgcatcgtcaacacccccaagcgcgggctcggcgacaag
gcggtggcgaacatccacctgctcgcccgcgccgagggcatcccgctgatgctggcggcg
gcgcggctgtgcgacaccgacgagctgaccggcgccgcccgcaagtcgctggggcggctg
gtcggcgatatcgcgcgctggcgcgatctctccaattcgctcgcccatcccgagctctgc
cgccagatcctcgacgagagcggctataccgcgatgctccaggccgatcgctcgaccgaa
agcgccgggcgcctggagaatctcaccgaactcgcccgcgcgatggaggaatatgagacg
ctcggcgccttcctcgaacatgtcagcctggtcatggacaatgagggcaatgacggcggc
gcgaaggtgacgatcatgaccgtccacgccgccaaggggctggagttcgacaccgtgttc
ctggtcggctgggaggaagggctgttcccctcgcagcgcgcgctcgacgagggcggcacc
aagagcctcgaggaggagcgccgcctcgcttatgtcgcgatcacccgcgcccggcggcgc
tgcgtgatcatccacgctgccaatcgccgcatctacggccagtggacctcctcgatcccg
tcgcgcttcgtcggcgaactgccggacgagcatatcgaggccgagaccaccatgtccggc
ggcgaatcgctgtggcgcgcgcaatggagcgagcgcgccgatccgttcgcgcatctggaa
cgcggcaccgggcgcggccccggctggcagcgtgccgcggcgctcggcgaaccggcggcg
cgttcgggccatggcgggcgcatcctggaggtcaaggcgtcggccgcctcctatgcggcc
aagccgcgatcggacgtcgcgatcggccaacgcgtgttccacaccaagttcggctacggc
accgtcgaggggatcgagggcaacaagctcgccatcgcgttcgagcaatcgggcaccaag
catgtgctggacagcttcgtcaccccggcctga
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