Sphingomonas abietis: PBT88_13690
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Entry
PBT88_13690 CDS
T09690
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sabi
Sphingomonas abietis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sabi03400
]
PBT88_13690
Enzymes [BR:
sabi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PBT88_13690
DNA repair and recombination proteins [BR:
sabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PBT88_13690
Prokaryotic type
PBT88_13690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
Motif
Other DBs
NCBI-ProteinID:
WBO21243
LinkDB
All DBs
Position
complement(2877682..2879067)
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AA seq
461 aa
AA seq
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MSAPVILWLRQDLRLADQPALVAACHDGPVIPLYVLDDEAPGPHAMGGASRWWLHHSLHA
LGEALHAKGSRLILRRGRAEQVIAALAEEAGAVSVHAIRHYEPWWVEAEKALARTLDLVV
HDGNQLAPPESITTGAGKPFKIYTPFWRALSHHMPPDEPLRTPAKIPSPSAWPKTETLGS
WDLLPTKPDWATGFEDWTPGEDGAHHRLDQFIGEAADYEAKRNLPSEEGSSRLSPHLHFG
EVSPRQVWHRVAGEGGGGSSGGRTFLGEIGWRDYAQTILLQYPRVGLRSTREQFDTMPWR
TGKAAKADLRAWQRGRTGYPIVDAGMRQLWATGWMHNRVRMIAASFLIKHLLIDWREGER
WFWDTLLDADYGNNSVNWQWTAGTGVDSNMFPRIMAPLSQSEKFDAADYIREWVPELRDL
PDKAIHDPEEAGCRPEGYPGKLIGHREARERALAAYATTKG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacccgtcatcctctggctccggcaggatctgcgcctcgccgatcagcccgcc
cttgtcgccgcctgccatgatgggccggtgatcccgctctatgtgctcgatgacgaggcg
ccggggccgcacgcgatgggcggtgcctcgcgctggtggctgcatcacagcctgcacgcg
ctgggcgaggcgctgcacgccaagggatcgcggctgatcctccggcgcggccgggcggaa
caggtgatcgcggcgctggccgaggaggccggggcggtgtcggtccacgccatccgtcac
tatgagccctggtgggtggaggccgaaaaggcgctggcccgaacgctcgatctggtcgtc
catgacggcaaccagctggcgccgcccgaatcgatcaccaccggggcgggcaagccgttc
aagatctacaccccgttctggcgggcattgtcgcaccacatgccgcccgacgagccgctg
cgcacgcccgcgaagattccatccccctcggcctggccgaagaccgagacgctggggtcg
tgggacttgctgccgaccaagccggactgggcgaccggcttcgaggattggacacccggc
gaagacggcgcgcaccatcggctcgaccagttcatcggcgaggcggcggactatgaggcg
aagcgaaacctgccgtcagaggagggcagctcgcgcctgtccccgcatctccatttcggc
gaagtgtcgccgcgacaggtctggcatcgcgtggcgggcgagggcggcggcgggagcagc
gggggccgcaccttcctcggcgagatcggctggcgcgattatgcgcagacgatcctgctg
caatatcccagggtcggcctgcgcagcacccgcgaacagttcgacacgatgccgtggcgc
accggcaaggcggcgaaggcggacctccgggcatggcagcggggccgtaccggctatccg
atcgtcgacgctgggatgcgccagctctgggcgaccggctggatgcacaaccgcgtccgc
atgatcgcggcgagctttctcatcaagcatctgctgatcgactggcgcgagggcgagcgc
tggttctgggatactctgctcgatgccgattacggcaacaacagcgtcaactggcagtgg
acggcgggcaccggcgtcgattccaacatgttcccgcggatcatggcgccgctcagccag
tccgagaagttcgacgcggccgattatatccgcgagtgggtgcccgaactgcgcgacctg
cccgacaaggcgatccatgatccggaggaggcaggctgccggccggagggctatccggga
aagctgatcggccaccgcgaggcgcgcgaacgggcgctggccgcctatgcgacgacgaaa
gggtga
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