Sphingomonas abietis: PBT88_14000
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Entry
PBT88_14000 CDS
T09690
Name
(GenBank) carbohydrate porin
KO
K07267
porin
Organism
sabi
Sphingomonas abietis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sabi02000
]
PBT88_14000
Transporters [BR:
sabi02000
]
Other transporters
Pores ion channels [TC:
1
]
PBT88_14000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
WBO21297
LinkDB
All DBs
Position
complement(2949798..2951156)
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AA seq
452 aa
AA seq
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MLALSCVAAPAVAQSQRDQSASEAPAAVQPTPSPVLPVQSANATPGPYQTYDALAMRGWE
RPLPKSGDTLLGDKLGVRDALADAGIGFIGFASNAIQYNFLQNDGGYKGRQLYNAQKLTR
NVSNAAIFATYDLGRIGITNGQFIFSALYTSNSFNRVDGPNATRIGRLAYYQSLFNKKVE
FKIGYFDNGFEFLGTQTGGSLAGGTLGPQASVPNEVGLSYSGFSTPTANIRINFKNHVYT
KLGIQRSLPPGGATPEVAANSSGLRFHIPGTGLLTIGEVGWDQPAKPGTLATWVRAGGIY
NSTNFNRFQGGQSKDNWATYIAVDHQLFQIDDSKANRGLYVGGTVNYAPPQQNFISQYYE
GRIYGVGLVKSRPFDLASIVANANIYSKQGLVARTAAGQGNFKQTYSVIASYAYRLTPGL
YFQPGIGAVVHPIYSPRFDTAVNGYLTLTFFI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccctgtcatgcgtggcggcgccggccgtcgcccaatcccagcgcgaccagtcg
gccagcgaggcacccgccgcggtgcagccgaccccgtcgccggtgctgccggtccagtcg
gccaatgccacgcccggcccctatcagacctatgatgcgctcgcgatgcgcgggtgggag
cggccgctgcccaaatccggcgacacgctgctcggcgacaagctgggcgttcgcgatgcg
ctggcggatgccgggatcggcttcatcggttttgccagcaacgcgatccagtataatttc
ctgcaaaatgatggcggctataagggcaggcagctctacaacgcccagaaattgacccgc
aacgtcagcaatgcggcgatcttcgcgacctatgatctcggccggatcggcatcaccaac
ggccagttcatcttctcggcgctctatacgtcgaacagcttcaaccgcgtcgacgggccg
aacgccacccgcatcgggcggctggcctattaccagtcgctgttcaacaagaaggtcgag
ttcaagatcggctatttcgacaatggcttcgaatttctcggcacccagaccggcggcagc
ctggccggcggcaccctggggccgcaggcgagcgtgcccaacgaggtcggcctgtcctat
tccggcttctcgacgccgaccgccaatatccggatcaacttcaagaatcatgtctatacc
aagctcggcatccagcgcagcctgccgccgggcggcgccacgccggaagtggcggccaat
tcgtccggcctgcgcttccacataccgggcaccggcctgctgacgatcggcgaggtgggc
tgggatcagccggccaagccgggcacgctggccacctgggtgcgcgctggcggcatctac
aacagcaccaatttcaatcgcttccaaggtgggcagagcaaggataactgggcgacctac
attgcggtcgatcaccagctgttccagatcgacgacagcaaggccaatcgcggcctctat
gtcggcggcaccgtcaactacgcgccgccgcagcagaatttcatttcgcaatattatgaa
ggccgcatctacggcgtcggcctggtgaagagccggcccttcgatctcgcctcgatcgtc
gccaacgccaatatctacagcaagcaagggctcgtcgcgcgcaccgccgccgggcagggc
aacttcaagcagacctattcggtgattgccagctatgcctatcgcctgactcccggcctc
tatttccagcccggcatcggcgcggtggtgcatcccatctacagcccgcgcttcgacacc
gcggtgaacggctatctgaccctgaccttcttcatctga
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