Sphingomonas abietis: PBT88_14020
Help
Entry
PBT88_14020 CDS
T09690
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sabi
Sphingomonas abietis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sabi02000
]
PBT88_14020
Transporters [BR:
sabi02000
]
Other transporters
Pores ion channels [TC:
1
]
PBT88_14020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WBO24651
UniProt:
A0ABY7NZ42
LinkDB
All DBs
Position
2954814..2957123
Genome browser
AA seq
769 aa
AA seq
DB search
MAWTGVGAMGVASTGGVAMGGATTYNIAAGPLRTALVNIGETAGITIGLADSALGEIRVH
AVHGRMSTAAALSHMLAGTPAWFRQIDAQTFLVVRRSPPAPLRHAVRATIPPPIPEIVVT
GSKRSAALSNYPGSVAMLDPSDLSRAEAARGSDTLVALLPILSSTHLGPGRNKLFIRGIA
DSSFNGPTEATVGQYLGDVRLNYSAPDPDLALYDIGSVEVLEGPQGTLYGAGSLGGVIRL
QPTPPDLTHWAGSLSAGIANTAHGTASGDGAIILNVPLIDDRLALRMVGYGSLDGGYIDD
PSRGKSAINRTITRGGRMTLRFAPAPDWTIDLGGVRQDIDSRDGQYATRGLPALQRASVI
AQPFDNDYSLASLEIHHQMGTVSLISATSVVDHDVGSTYDASPAIATPTRYHEQHDIMLV
TNETRLSHRAATGGGWTIGIELLRSADRLRRTLGPAGAEASLAGTSNTVEEASLYGEATL
ALGSRWFATAGGRLSVTRQVGDVLDLASGDDDHDRHALAALPSIGLTWKAAPRLAFYARY
QEGFRPGGIAVQAGAVQHFEGDSVATWEAGLRYGAAGDRFSAVAALSYAHWEDIQADLVD
AQGLPYTANIGSGRIAGIELKSSWRPTDTLTVDGALFANESDLSKPDPAFAGEKDASLPN
IADLTLRLGFTYHMQFAGRPISLTGSADYVGHSRLGVGPLLDLHQGGYVETRLGMSVPVG
RVTLSLAANNLLNARGNIFALGDPFGVTNADQITPMRPRTVRLGATVPF
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcttggaccggtgtcggtgcgatgggcgtggcttcgacgggcggcgtggccatgggc
ggcgcgacgacgtacaacatcgccgctggcccgttacggacggcgctggtcaatatcggc
gaaaccgctggcatcacgatcgggcttgcggattccgcgctgggcgagattcgcgttcac
gccgtgcatggccggatgagcaccgccgccgcgctgagccatatgctcgcagggacgcct
gcctggtttcgacagatcgatgcacagacgtttctggtcgttcgccgctccccgcctgcg
ccgctccgccatgctgtacgcgccacaatcccgcccccaatccccgagatcgtcgtcacc
ggcagcaagcgatcggccgcgctgtcgaactatcccggcagcgtcgccatgctcgatccg
tccgatctcagcagggccgaggcagccagaggcagcgacacactggtcgccctcctgccc
atattgtcgtcgacccacctcgggccgggtcgcaacaagctgttcatccggggcattgcc
gattcaagcttcaacgggccgaccgaagccacggtcggccagtatctcggcgacgtccgg
ctcaattacagcgcgccggatcccgatctcgcgctctatgacatcggatcggtcgaggtg
ctggaggggccacaaggcacgctctatggcgccggatcgctcggcggcgtcattcgcctg
caaccgaccccgcccgatctgacgcactgggccgggagcctgtctgccggcattgcgaac
accgcccacggcaccgcgagcggcgatggcgcgatcatcctcaacgtcccgctgatcgac
gatcggctggcgctgcggatggtgggctatggcagcctcgacggcggctatatcgatgat
ccgtcgcgcggcaaatcggccatcaaccggaccatcacgcgcggcgggcggatgacgctg
cgcttcgccccggccccggactggacgatcgatctcggcggcgtccgtcaggatatcgac
agccgcgacggccaatatgccacgcgcggcctgcccgcgctccagcgcgcaagcgtcatc
gcccagccgttcgacaatgattactcgctcgccagcctggaaatccaccatcagatgggc
acggtatcgctgatctccgcgacatcggtcgtggatcatgatgtcggatcgacctatgat
gccagccccgcgatcgccacgccgacgcgctatcacgaacagcatgacatcatgctcgtc
accaacgagacccggctgtcgcacagggccgcgaccggcggcggctggacgatcggcatc
gaattgctgcgcagcgccgatcgattgcgccgcacgctcggcccggccggcgcggaggcc
agcctagccggcaccagcaacacggtggaagaggcatcgctctatggcgaagcgaccctc
gcactgggctcgcgctggttcgcgaccgccggagggcggttgagtgtgacccgccaggtc
ggcgacgtgctcgatctggcgagcggtgacgacgatcacgaccgccatgcccttgcggcc
ctcccgtcgatcggcctgacctggaaagcggcgccgcgcctggccttctatgcgcggtat
caggagggattccggcccggcgggatcgccgtccaggccggcgccgtccagcatttcgaa
ggagacagcgtcgcgacctgggaggcgggcctgcgttatggtgcggccggcgatcggttc
agtgcggtagccgccctctcctatgcgcattgggaggatatccaggccgatctcgtcgat
gcgcagggcctgccctacaccgccaatatcggatcgggccggatcgccggcatcgaactc
aaatcgagctggcgaccgaccgacaccctcacggtcgacggcgccctcttcgccaatgag
agcgacctgtcgaaacccgaccccgccttcgccggcgagaaggacgcgtcgctacccaac
atcgccgatctgacgctccggctgggcttcacctatcatatgcagttcgccggccgcccg
atcagcctgacaggctcggccgactacgtcggccattcacggctgggcgtcggcccgttg
ctcgacctgcaccaaggtggctatgtcgaaacccggctcgggatgagcgtgccggtcggt
cgcgtgacgctgtcgctggccgccaacaatctgctcaacgcccggggcaacatctttgca
ctgggcgatccgttcggcgtcaccaacgccgatcagattacgccgatgcggccgcgtacc
gtccgcctcggcgcgacggtccctttctaa
DBGET
integrated database retrieval system
