Sphingomonas abietis: PBT88_14355
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Entry
PBT88_14355 CDS
T09690
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sabi
Sphingomonas abietis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sabi02000
]
PBT88_14355
Transporters [BR:
sabi02000
]
Other transporters
Pores ion channels [TC:
1
]
PBT88_14355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF1381
Motif
Other DBs
NCBI-ProteinID:
WBO21362
UniProt:
A0ABY7NJE0
LinkDB
All DBs
Position
complement(3035572..3037692)
Genome browser
AA seq
706 aa
AA seq
DB search
MGLVGLTMLIGGTPVLAEDVATAPDKSGGEIVVTAERRTTPLQTTPLSVGVLSGKDIQEQ
KLVQLRDLSSSVAGLQVPAAATPSLSYLFIRGIGTISPTYSGAVGIYVDDVYQARVINSG
IFGLPDIERIEVLRGPQGTLYGQNTSAGAIKIVSKTPGNDFTGSFSLAAGNLKQLDGSAY
VSGPIVTDVLSASFAYAHDETGGFTENVTLGKKVNRVHTDQGRVKLHFTPAGDAGPDVNA
SFYFLRDRSDNAALSPLNVADPNPRVTYENLDLRIHNNNYLGSLSVAQKLDDHLTAKSIT
GYRWFDDSPDPWSQDGLATDTFEWQLNLHQRQFSQELQLLGDYGRLTFSSGAIYYHEHFI
ADRPNVTFGVRGGAISKTVTDSVGIYTQGHYAITPRFGVTAGLRYYRQWDDYDNSGYTSN
ADFQPIATTYSLTGLKQTTHGLTPKVGIDYKFSSSLFAYASYTKGQKSGGYNPVAAAAVI
AAIAIKPEKVTTYEAGLKIGSGRAPVQFNISGFYNDFRDYQTNLSNVLLNGILVNGSVAF
NAQKSRTYGVEVETILHPVKALELRVNGTALSAKFTRFTYQTAFGSGSYTGNQLPYASKY
NLGASAAYTLPIGELGDVKLRGEVKYTSRGYADLTNVTVLPKQTYVNLDANFTTANKHWQ
IFVRARNLLDKTYAIGGIPITPTIPGVLATTYNPPRTVEGGATYSF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtggggcttgtgggcctcacgatgctcatcggcggtacgccggtgcttgccgaggatgtg
gccaccgcgcctgacaaatcgggtggggagatcgtcgtgacggcagagcggcgtaccacg
ccgctccagacgacaccgctttcggtcggcgtgctgagcggcaaggatatccaggaacag
aaactcgtgcagctgcgcgacctgtccagttcggtggctggcctccaggtgccggcggcc
gcgacgcccagcctttcgtatctgttcattcgcggcatcggcacgatctcgccgacctat
agcggcgcggtcggcatctatgtggatgacgtctatcaggcgcgtgtcatcaacagcggc
atcttcggcctgccggacatcgagcggatcgaggtgctgcgcgggccgcagggcacgctg
tacggtcagaataccagcgcgggcgcgatcaagatcgtctcgaagacgcccggcaatgat
ttcaccggctccttctcgcttgctgcgggcaatctgaagcaactcgatggcagcgcttat
gtgtcgggcccgatcgtgacggacgtgctgtccgcgagtttcgcctatgcccatgacgaa
accggcgggttcaccgagaacgtcacgctcggcaagaaggtcaatcgggtccacaccgat
caggggcgggtgaagctccatttcacgccggccggcgatgcaggccccgatgtgaacgcc
tccttctatttcctgcgcgaccgatccgacaacgccgcgctctcgccgctcaacgtcgcc
gatccgaatccgcgcgtgacctacgaaaatctcgatctgcgcatccacaacaacaattat
ctcggctcgctgtcggtcgcgcagaagctcgacgaccatctgaccgcgaagtcgatcacc
gggtatcgctggttcgacgattcgcccgacccctggtcgcaggacggcctcgccaccgat
acgttcgaatggcaactgaatctccatcagcggcaattttcgcaggagcttcagctgctc
ggcgattatggacggctgacattcagttcgggcgcgatctactatcacgagcatttcatc
gccgatcggcccaacgtcaccttcggcgtgcgtggcggcgcgatcagcaagaccgtcacc
gacagcgtcggtatctatacccagggccattatgcgatcacgcctcggttcggggtgacg
gcgggactgcgttattatcgccagtgggacgattatgataacagcggctacacgtcgaac
gccgatttccagcccatcgcgaccacctattcgctgaccggcctcaagcagaccacccac
gggctgaccccgaaagtcgggatcgactataaattctccagcagcctgttcgcctatgcg
agctacaccaagggccagaaatccggcggctacaatccagtggcggcggccgccgtcatc
gcggcgatcgcgatcaagccggagaaggtcaccacctatgaagccggcctgaagatcgga
tcgggccgcgcgcccgtccaattcaacatcagcggcttctacaacgatttccgcgactat
cagacgaacctgtccaacgtcttgctgaacggcatattggtcaacggatcggtggcgttc
aacgcccagaagtcgcggacttacggcgtcgaggtcgaaacgatcctgcatcccgtcaag
gccctggagctgcgggtgaacggaaccgcactcagcgccaagttcacccgcttcacctat
cagaccgcattcggcagcggctcctacaccggcaaccagctgccttacgcgtccaaatat
aatctcggcgcgagcgcggcttacacattgccgatcggcgagctgggtgatgtcaagcta
cgcggcgaggtgaagtacacatcgcgcggctacgccgatctcaccaacgtcacggtcctg
ccgaagcagacctacgtcaatctcgacgcgaacttcacgaccgcgaacaagcattggcag
atcttcgtgcgggccagaaacctgctcgacaagacctacgcgatcggtggcatcccgatc
accccgacgatcccgggcgtgctcgccaccacctacaatccgccccgcactgtcgagggc
ggcgccacctacagcttctga
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