Sphingomonas abietis: PBT88_14725
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Entry
PBT88_14725 CDS
T09690
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00300
Lysine biosynthesis
sabi00470
D-Amino acid metabolism
sabi01100
Metabolic pathways
sabi01110
Biosynthesis of secondary metabolites
sabi01120
Microbial metabolism in diverse environments
sabi01230
Biosynthesis of amino acids
Module
sabi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PBT88_14725 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PBT88_14725 (dapF)
Enzymes [BR:
sabi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PBT88_14725 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WBO21431
UniProt:
A0ABY7NIT5
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All DBs
Position
3131051..3131881
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AA seq
276 aa
AA seq
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MAQRFHKMHGLGNDFVVFDARVAPVEITPARAHAIADRHTGIGCDQLIVIEPSTVATARM
RIWNGDGSEVESCGNATRCVAMLLGDGATIETLGGILDATITKIGTTGAASVDMGAPRFD
WDAVPLDYPMDTMALPLAWDGLAPIAPPIALSVGNPHVIFFVPDTDAVDLEAAGRPIEHD
PVFPERINVNVATIESRSRIRLRVWERGAGATLACGTGACATAVAAIRSGRVDSGVTVAL
PGGELVIDWQPGGTIRMTGPATHVFTGELDMDAFPA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacgctttcacaagatgcacgggctgggcaacgacttcgtcgtgttcgacgcg
cgcgtcgcgccggtcgagatcacgccggcccgcgcccatgcgatcgccgatcgccacacc
ggcatcggctgcgaccaattgatcgtcatcgagccttccacggtggccaccgcgcggatg
cggatctggaacggcgacggcagcgaggtggaaagctgcggcaacgccacccgctgcgtg
gcgatgctgctcggcgacggcgcgaccatcgagacgctgggcggcatcctcgacgcgacg
atcacgaaaatcggcaccaccggcgccgccagcgtcgacatgggggcgccccgtttcgac
tgggatgcggtgccgctcgactatccgatggacacgatggcgctgccattggcgtgggac
gggctggccccgatcgccccgccgatcgcgctgagcgtcggcaacccgcatgtcatcttc
ttcgtgcccgacaccgatgcggtcgatctcgaagcggcgggccgcccgatcgagcatgat
ccggtgttcccggaacggatcaacgtcaacgtcgccaccatcgagagccgcagccgcatc
cggctgcgcgtgtgggagcgcggcgccggcgcgacgctcgcctgcggcaccggcgcctgc
gccaccgccgtcgccgcgatccgctcgggccgcgtcgacagcggcgtcacggtggcgctg
cccggcggcgaactggtgatcgactggcaaccgggcggcacgatccgcatgaccggcccc
gccacccatgtcttcaccggcgaactggacatggacgccttcccggcatga
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