KEGG   Sphingomonas abietis: PBT88_14725
Entry
PBT88_14725       CDS       T09690                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sabi  Sphingomonas abietis
Pathway
sabi00300  Lysine biosynthesis
sabi00470  D-Amino acid metabolism
sabi01100  Metabolic pathways
sabi01110  Biosynthesis of secondary metabolites
sabi01120  Microbial metabolism in diverse environments
sabi01230  Biosynthesis of amino acids
Module
sabi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sabi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PBT88_14725 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PBT88_14725 (dapF)
Enzymes [BR:sabi01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PBT88_14725 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: WBO21431
UniProt: A0ABY7NIT5
LinkDB
Position
3131051..3131881
AA seq 276 aa
MAQRFHKMHGLGNDFVVFDARVAPVEITPARAHAIADRHTGIGCDQLIVIEPSTVATARM
RIWNGDGSEVESCGNATRCVAMLLGDGATIETLGGILDATITKIGTTGAASVDMGAPRFD
WDAVPLDYPMDTMALPLAWDGLAPIAPPIALSVGNPHVIFFVPDTDAVDLEAAGRPIEHD
PVFPERINVNVATIESRSRIRLRVWERGAGATLACGTGACATAVAAIRSGRVDSGVTVAL
PGGELVIDWQPGGTIRMTGPATHVFTGELDMDAFPA
NT seq 831 nt   +upstreamnt  +downstreamnt
atggcgcaacgctttcacaagatgcacgggctgggcaacgacttcgtcgtgttcgacgcg
cgcgtcgcgccggtcgagatcacgccggcccgcgcccatgcgatcgccgatcgccacacc
ggcatcggctgcgaccaattgatcgtcatcgagccttccacggtggccaccgcgcggatg
cggatctggaacggcgacggcagcgaggtggaaagctgcggcaacgccacccgctgcgtg
gcgatgctgctcggcgacggcgcgaccatcgagacgctgggcggcatcctcgacgcgacg
atcacgaaaatcggcaccaccggcgccgccagcgtcgacatgggggcgccccgtttcgac
tgggatgcggtgccgctcgactatccgatggacacgatggcgctgccattggcgtgggac
gggctggccccgatcgccccgccgatcgcgctgagcgtcggcaacccgcatgtcatcttc
ttcgtgcccgacaccgatgcggtcgatctcgaagcggcgggccgcccgatcgagcatgat
ccggtgttcccggaacggatcaacgtcaacgtcgccaccatcgagagccgcagccgcatc
cggctgcgcgtgtgggagcgcggcgccggcgcgacgctcgcctgcggcaccggcgcctgc
gccaccgccgtcgccgcgatccgctcgggccgcgtcgacagcggcgtcacggtggcgctg
cccggcggcgaactggtgatcgactggcaaccgggcggcacgatccgcatgaccggcccc
gccacccatgtcttcaccggcgaactggacatggacgccttcccggcatga

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