Sphingomonas abietis: PBT88_14890
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Entry
PBT88_14890 CDS
T09690
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi03030
DNA replication
sabi03430
Mismatch repair
sabi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBT88_14890
03430 Mismatch repair
PBT88_14890
03440 Homologous recombination
PBT88_14890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sabi03032
]
PBT88_14890
03400 DNA repair and recombination proteins [BR:
sabi03400
]
PBT88_14890
Enzymes [BR:
sabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBT88_14890
DNA replication proteins [BR:
sabi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PBT88_14890
DNA repair and recombination proteins [BR:
sabi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PBT88_14890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_5
AAA_22
RuvB_N
AAA_30
AAA_19
AAA_14
AAA_16
AAA_24
AAA_assoc_2
DUF815
Adeno_E1B_55K_N
AAA_18
Glyco_tranf_2_5
AAA_2
PIF1
Motif
Other DBs
NCBI-ProteinID:
WBO21461
LinkDB
All DBs
Position
complement(3155548..3157197)
Genome browser
AA seq
549 aa
AA seq
DB search
MARSATRLAAMTESAPYRVLARKYRPQRFDQLIGQDAMVQTLGNAIRRGRLAHAFLMTGV
RGVGKTSTARLIAKALNCIGEDGQGGPTIDPCGVCEPCKAIAEGRHIDVVEMDAASHTGV
DDVREIIEAVRYAAVSARYKIYIIDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVNK
VPITVLSRCQRFDLRRISAELLAQHFAHVVEAEEVAAEPEALALIARAAEGSARDGLSIL
DQAIAHAGAEASGVSAAQVREMLGLSDRGAVRRLFALLLSGDAPAVLAALAEQHVLGVEP
AALFRGLLEAVHGITRAKAGGVPDPAQSVEERQALDAWAGKLGHATLHRLWQLLLKGLSE
VETTAMPMEAAEMALLRVVHASSLPDPGELLRRLQSGEPMPALDAAPPVAPAAGGSGPSA
SVVAVAPAPPVVRAPESFAALVEAVSGRHAHLAQQLHDYASVIRYAPPELELCPRRPIDG
HVAKALDDIAPIGWKVVMSDQPGAPTLREQELAAKADEDRAIRESPVVAAVFAAFPGAEL
IEDDQRSIA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaggtcggcgactagattggcggcgatgacagaatccgcaccctatcgcgtgctc
gcgcgcaaataccggccgcagcgtttcgaccagctcatcgggcaggatgcgatggtgcag
acgctgggcaatgcgatccggcgcgggcggctggcccatgcctttctgatgaccggcgtg
cgcggggtggggaagacctccaccgcgcggctgatcgccaaggcgctgaactgcatcggc
gaggacgggcagggcggcccgacgatcgatccctgcggcgtctgcgagccgtgcaaggcg
atcgccgaggggcgccatatcgacgtggtcgagatggacgccgcctcccacaccggcgtc
gatgacgtgcgcgagatcatcgaggcggtgcgctatgcggcggtctcggcgcgctacaag
atctacatcatcgacgaagtccacatgctgtcgaagaatgcgttcaacgcgcttttgaag
acgctcgaggaaccccctgcgcacgttaagtttttgttcgcgaccaccgaagtgaacaag
gtgccgatcacggtgctgtcgcgctgccagcgcttcgacctgcggcggatctcggcggag
ctgctcgcccagcatttcgcccatgtcgtggaagcggaggaggttgcggccgagcccgag
gcgctggcgctgatcgcacgcgccgccgaagggagcgcgcgcgacgggctgtcgatcctc
gatcaggccatcgcccacgccggcgccgaggcctccggcgtctcggccgcgcaggtgcgc
gagatgctcggcctgtccgaccgcggcgcggtgcggcggctgttcgcgctgctgctgtcc
ggcgatgccccggcggtgctggcggcgctggccgagcaacatgtgctgggcgtcgagccc
gctgcgctgttccgcgggctgctggaggcggtccatggcatcacgcgggccaaggccggc
ggcgtgcccgatccggcgcagtcggtcgaggaacggcaggcgctggacgcatgggccggc
aagctcggccatgcgacgctccaccggctgtggcagctgctgctcaaggggctgagcgag
gtcgagaccacggcgatgccgatggaggccgccgagatggcgctgctccgcgtcgtccat
gccagttcgctgcccgatcccggcgagttgctgcggcgcctgcaatcgggcgagccgatg
ccggcgctggatgccgcgccgccggtggcgccggcggccggcgggtcaggcccgagcgcg
agcgtggtagcggttgcgccggctccccccgtcgtgcgtgcgcccgagagcttcgccgct
ttggtggaggcggtgtccggccgccatgcccatctcgcgcagcagctccacgattatgcc
agcgtgatccgttacgcgccgcccgagctggagctgtgcccccgccgcccgatcgacggc
catgtcgccaaggcgctggacgatatcgcgccgatcggctggaaggtggtgatgagcgac
cagcccggcgcgccaaccttgcgcgagcaggaactcgccgccaaggcggacgaggatcgc
gccattcgcgagagcccggtggtcgcggcggtgttcgccgccttccccggcgccgaactt
atcgaagacgatcaacggagtatcgcatga
DBGET
integrated database retrieval system
