Sphingomonas abietis: PBT88_17760
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Entry
PBT88_17760 CDS
T09690
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
sabi
Sphingomonas abietis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sabi03000
]
PBT88_17760
Transcription factors [BR:
sabi03000
]
Prokaryotic type
Helix-turn-helix
IclR family
PBT88_17760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR
MarR_2
TrmB
HTH_24
HTH_5
Dimerisation
HTH_DeoR
HTH_9
Penicillinase_R
Rrf2
HTH_27
Fe_dep_repress
TetR_N
GntR
HTH_45
HTH_20
HTH_Crp_2
LexA_DNA_bind
RPA_C
Motif
Other DBs
NCBI-ProteinID:
WBO21983
LinkDB
All DBs
Position
complement(3800161..3800961)
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AA seq
266 aa
AA seq
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MTSFAPVRAVQRGLAVLRVISESGPLSIREIVERCGMAQPTVVRMLETLIHEGFVYRQNG
TAVYKVTGRTMTLSAGFDSKSRLLEVAMPIIDRLHVQIGWPSNLAMFDRDAMVIIYSNRA
ALGLSIPGRLGARLPLLATGVGLVTLASLSEGDREDALRHAAKAGDRWSNEARLLAGLPE
KLGKISLDGHAFADEGYLDTIYQSLIWAVAVPIVTGDGQAVAAISSLVLRNAGARQKLLA
SILPKLRAAASDIGRAIDEDRASGSQ
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttcgcgccggtacgagccgtccagcgcggcttggccgtgctccgcgtcatc
agcgaaagcgggccgctctcgatccgggagatcgtcgagcggtgcggcatggcgcaaccg
accgtcgtgcgcatgctcgaaaccctcatccatgaggggtttgtctaccgccagaacggc
accgcggtgtacaaggtcacaggccgcaccatgacattgagcgccggcttcgattcgaaa
tcgagattgctcgaggtcgcgatgccgatcatcgaccggttgcacgttcaaatcgggtgg
ccgtccaacctcgccatgttcgatcgcgatgccatggtgatcatctattccaatcgggcg
gcattgggcctgtcgatccccggtcgcctgggggccaggctgccgcttctggccaccggc
gtcggcctcgtgacgcttgccagcctgtccgaaggcgatcgcgaggatgctctgcggcat
gcggcgaaggcgggagatcgctggagcaacgaggcccggcttctcgccggcctgcccgag
aagctgggaaagatatcgctcgatggccatgccttcgccgacgaaggctatctggacacg
atttatcagtcgctcatctgggccgtcgcggtcccgatcgtgacgggggacgggcaggcg
gttgcggcgatcagcagcctggtgctgcgcaatgcgggcgcgcggcagaagctgctcgct
tccatcctgcccaaattacgggccgccgcgtccgatatcggtcgggccatcgacgaagat
cgcgcctcgggatcgcagtga
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