Sphingomonas abietis: PBT88_19875
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Entry
PBT88_19875 CDS
T09690
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PBT88_19875 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sabi03400
]
PBT88_19875 (ruvB)
Enzymes [BR:
sabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PBT88_19875 (ruvB)
DNA repair and recombination proteins [BR:
sabi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PBT88_19875 (ruvB)
RecFOR pathway proteins
PBT88_19875 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_3
nSTAND3
AAA_22
AAA_18
AAA_2
Bac_DnaA
Sigma54_activat
AAA_14
AAA_17
Rad17
TsaE
NTPase_1
RNA_helicase
AAA_33
AAA_28
AAA_24
NB-ARC
ABC_tran
AAA_25
NACHT
Parvo_NS1
IstB_IS21
PEPCK_ATP
Motif
Other DBs
NCBI-ProteinID:
WBO22367
LinkDB
All DBs
Position
complement(4205091..4206116)
Genome browser
AA seq
341 aa
AA seq
DB search
MAEPDRLIAADRKPEDIDAALRPKSLDDFVGQKAARENLRVFIGAAKARGEAMDHVLFFG
PPGLGKTTLAQIVARELGVGFRATSGPVIAKSGDLAALLTNLEEGDVLFIDEIHRLQPAV
EEVLYPAMEDRVLDLMIGEGPSARSVRIELPRFTLVGATTRQGLLTTPLRDRFGIPVRLQ
FYTVDELERVVSRAARLLALDISTDGATEIARRARGTPRIAGRLLRRVRDFAHMAGDPLV
DAKVADAALTRLEVDVLGLDAMDRRYLLMIADIYRGGPVGVETLAAGLSEPRDTVEEVIE
PYLIQLGLLARTARGRCLTGRAWAHLGLPMPAGAQDGLFDL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccagaccgccttatcgccgccgatcgcaagcccgaggacatcgatgcggcg
ctgcgccccaagtcgctcgacgatttcgtcgggcagaaggcggcgcgcgagaatctgcgc
gtgttcatcggcgccgccaaggcccgcggcgaggcgatggaccatgtgctgttcttcggc
ccgcccggcctcggcaagaccacgctcgcccagatcgtcgcgcgcgagctcggcgtcggc
ttccgcgccacctccggcccggtgatcgccaagtcgggcgatctcgccgctttgctgacc
aatctggaagagggcgacgtcctcttcatcgacgagatccaccgcctccagcccgccgtc
gaggaggtgctctatccggcgatggaggatcgcgtgctcgatctgatgatcggcgagggg
ccgtcggcgcgctcggtgcggatcgagctgccgcgcttcaccctggtcggtgcgaccacc
cgccaggggctgctgacgacgccgctgcgcgatcgcttcggcattcccgtgcgcctgcaa
ttctacacggtggacgagctggagcgcgtcgtcagccgcgccgcgcggctgctcgcgctc
gacatctcgaccgacggcgccaccgagatcgcgcgccgcgcccggggcacgccgcgcatc
gccggccggctgctgcgccgggtccgcgatttcgcgcacatggccggcgacccgctggtc
gacgcgaaggtggcggatgccgcgctgacccggctcgaggtcgatgtgctcggcctcgat
gcgatggaccggcgctatctgctgatgatcgccgacatctatcgtggcggcccggtcggc
gtcgagacgctggcggccggcctgtccgagccgcgcgacacggtggaggaggtgatcgag
ccctatctcatccagctcgggctgctcgcccgcaccgcgcgcggccgctgtctgaccggg
cgggcctgggcgcatctcggcctgccgatgccggcgggcgcgcaggacggcctgttcgac
ctctaa
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