KEGG   Sphingomonas abietis: PBT88_19875
Entry
PBT88_19875       CDS       T09690                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
sabi  Sphingomonas abietis
Pathway
sabi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sabi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PBT88_19875 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sabi03400]
    PBT88_19875 (ruvB)
Enzymes [BR:sabi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PBT88_19875 (ruvB)
DNA repair and recombination proteins [BR:sabi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PBT88_19875 (ruvB)
    RecFOR pathway proteins
     PBT88_19875 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 AAA_3 nSTAND3 AAA_22 AAA_18 AAA_2 Bac_DnaA Sigma54_activat AAA_14 AAA_17 Rad17 TsaE NTPase_1 RNA_helicase AAA_33 AAA_28 AAA_24 NB-ARC ABC_tran AAA_25 NACHT Parvo_NS1 IstB_IS21 PEPCK_ATP
Other DBs
NCBI-ProteinID: WBO22367
LinkDB
Position
complement(4205091..4206116)
AA seq 341 aa
MAEPDRLIAADRKPEDIDAALRPKSLDDFVGQKAARENLRVFIGAAKARGEAMDHVLFFG
PPGLGKTTLAQIVARELGVGFRATSGPVIAKSGDLAALLTNLEEGDVLFIDEIHRLQPAV
EEVLYPAMEDRVLDLMIGEGPSARSVRIELPRFTLVGATTRQGLLTTPLRDRFGIPVRLQ
FYTVDELERVVSRAARLLALDISTDGATEIARRARGTPRIAGRLLRRVRDFAHMAGDPLV
DAKVADAALTRLEVDVLGLDAMDRRYLLMIADIYRGGPVGVETLAAGLSEPRDTVEEVIE
PYLIQLGLLARTARGRCLTGRAWAHLGLPMPAGAQDGLFDL
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggccgaaccagaccgccttatcgccgccgatcgcaagcccgaggacatcgatgcggcg
ctgcgccccaagtcgctcgacgatttcgtcgggcagaaggcggcgcgcgagaatctgcgc
gtgttcatcggcgccgccaaggcccgcggcgaggcgatggaccatgtgctgttcttcggc
ccgcccggcctcggcaagaccacgctcgcccagatcgtcgcgcgcgagctcggcgtcggc
ttccgcgccacctccggcccggtgatcgccaagtcgggcgatctcgccgctttgctgacc
aatctggaagagggcgacgtcctcttcatcgacgagatccaccgcctccagcccgccgtc
gaggaggtgctctatccggcgatggaggatcgcgtgctcgatctgatgatcggcgagggg
ccgtcggcgcgctcggtgcggatcgagctgccgcgcttcaccctggtcggtgcgaccacc
cgccaggggctgctgacgacgccgctgcgcgatcgcttcggcattcccgtgcgcctgcaa
ttctacacggtggacgagctggagcgcgtcgtcagccgcgccgcgcggctgctcgcgctc
gacatctcgaccgacggcgccaccgagatcgcgcgccgcgcccggggcacgccgcgcatc
gccggccggctgctgcgccgggtccgcgatttcgcgcacatggccggcgacccgctggtc
gacgcgaaggtggcggatgccgcgctgacccggctcgaggtcgatgtgctcggcctcgat
gcgatggaccggcgctatctgctgatgatcgccgacatctatcgtggcggcccggtcggc
gtcgagacgctggcggccggcctgtccgagccgcgcgacacggtggaggaggtgatcgag
ccctatctcatccagctcgggctgctcgcccgcaccgcgcgcggccgctgtctgaccggg
cgggcctgggcgcatctcggcctgccgatgccggcgggcgcgcaggacggcctgttcgac
ctctaa

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