Sphingomonas abietis: PBT88_20240
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Entry
PBT88_20240 CDS
T09690
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00051
Fructose and mannose metabolism
sabi00541
Biosynthesis of various nucleotide sugars
sabi01100
Metabolic pathways
sabi01250
Biosynthesis of nucleotide sugars
Module
sabi_M01019
GDP-6-deoxy-Tal biosynthesis, GDP-Man => GDP-6-deoxy-Tal
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
PBT88_20240 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PBT88_20240 (gmd)
Enzymes [BR:
sabi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
PBT88_20240 (gmd)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
WBO22434
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Position
4275118..4276155
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AA seq
345 aa
AA seq
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MPKTAIVTGISGQDGAYLAENLLGRGYTVYGTYRRTSSVNFWRIDELGITNHSQLKLVEY
DLTDMGSAIRLIEASEATEVYNLAAQSFVGVSFDQPITTGQITGLGAAYLLEAIRTVNRD
IRFYQASTSEMFGKVQAIPQTEDTPFYPRSPYGVAKLYAHWLTVNYRESFGIFGASGILF
NHESPLRGREFVTRKITDTVAKIAQGKAEVLELGNLDAKRDWGYAKDYVEGMRLMLQHDV
ADTYVLATNRTEPVRHFVELAFAQVGIELDWSGKEENETGIDRKSGKTLVRVNPAFYRPA
EVDLLIGSPAKAAQDLGWTPTVQLEELTRLMMEADMRRNAAGWSF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaccgccatcgtcaccgggattagcggccaggatggcgcgtatttggcggaa
aacctgctagggcgtgggtatacggtctatgggacgtatcgccggacgagctctgtcaat
ttctggcggatcgacgagcttggcatcaccaaccattcccagctcaagctcgtcgaatat
gacctcaccgacatggggtcggcaatccggctgattgaagcttctgaggcgaccgaggtg
tacaacctcgccgcgcagagcttcgtcggcgtgtcgttcgaccagccgatcacgaccggc
cagatcaccgggctcggcgccgcttatctcttggaggcgattcgcacggttaatcgcgat
atccgcttctaccaggcgtcgacctcggagatgttcggcaaggttcaggcgatcccgcag
accgaggatacgcctttctacccgcgcagcccatacggcgtggcaaagctctacgcgcat
tggctgactgtcaactatcgcgaaagcttcgggattttcggagccagcggcatcctgttc
aaccatgaatcgccgctgcgtggtcgcgagttcgtgacgcgcaagatcaccgatacagtc
gccaagatcgcacagggcaaggctgaggtgctcgagctgggtaatctcgatgcgaagcgc
gactggggctatgccaaggactatgttgaaggcatgcgactgatgctccagcatgacgtt
gccgacacctacgtcctcgcaactaaccggactgagccggtgcgccacttcgttgagttg
gctttcgcgcaggtcggcatcgagctcgactggtcgggcaaggaagagaacgaaaccggg
atcgatcgcaagagcggcaagacgcttgtacgcgtcaatccggccttctatcgtccggcg
gaagtcgatctgctgatcggcagccctgccaaggcggcgcaggatcttggctggacgccc
acagtgcagctggaggaactcacgcgcctgatgatggaagcagacatgcggcgcaacgct
gcgggttggtcgttctga
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