Sphingomonas abietis: PBT88_20400
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Entry
PBT88_20400 CDS
T09690
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PBT88_20400 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sabi03400
]
PBT88_20400 (ung)
Enzymes [BR:
sabi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PBT88_20400 (ung)
DNA repair and recombination proteins [BR:
sabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PBT88_20400 (ung)
Prokaryotic type
PBT88_20400 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WBO22461
UniProt:
A0ABY7NSK0
LinkDB
All DBs
Position
complement(4304492..4305202)
Genome browser
AA seq
236 aa
AA seq
DB search
MADAQPVKLHASWREPLAEEFASPYMAALRQFLVAEKAAGKRIFPKGNEWFRALDLTPLD
AVRVVILGQDPYHGEGQAHGLCFSVQPGVRPPPSLVNIYKELHSDLGLARPGHGFLEHWA
KQGVLLLNSVLTVESGLAASHKGRGWESFTDAVIRLVAAKETPVVFLLWGSYAQKKAAFV
QSVAQGGRHLVLKAAHPSPLSAHNGFFGSRPFSQANAFLEAHGETPVDWSLPEIHR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcgcaacccgtgaagctgcacgcaagctggcgcgagccgctcgccgaggaa
ttcgccagcccctatatggcggcgctgcgccagttcctcgtcgccgagaaggcggccggc
aagcgcatcttccccaagggcaacgagtggttccgcgcgctcgacctgaccccgctcgac
gcggtgcgggtcgtgatcctcggccaggatccctatcatggcgagggccaggcgcatggc
ctgtgcttctcggtccagcccggcgtccgcccgccgccgagcctcgtcaacatctacaag
gagctgcacagcgaccttggcctcgcccggcccggccacggcttcctcgaacattgggcg
aagcagggcgtgctgctgctgaactcggtgctgaccgtggagagcggtctcgccgccagc
cacaagggccgcggctgggagagcttcaccgacgcggtgatccggctggtcgcggcgaag
gagacgccggtcgtcttcctgctgtggggcagctacgcgcagaaaaaggcggcgttcgtg
cagagcgtcgcgcagggcggccgccatctggtgctgaaggcggcgcacccctcgccgctc
tcggcgcacaacggctttttcgggagccggcctttctcgcaggccaacgccttcctggag
gcgcatggcgaaaccccggtggactggtcgctgccggagattcaccggtag
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integrated database retrieval system
