Flaviramulus sp. BrNp1-15: MBM09_01245
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Entry
MBM09_01245 CDS
T07901
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sabu
Flaviramulus sp. BrNp1-15
Brite
KEGG Orthology (KO) [BR:
sabu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MBM09_01245 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sabu03019
]
MBM09_01245 (rnc)
03009 Ribosome biogenesis [BR:
sabu03009
]
MBM09_01245 (rnc)
03036 Chromosome and associated proteins [BR:
sabu03036
]
MBM09_01245 (rnc)
Enzymes [BR:
sabu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
MBM09_01245 (rnc)
Messenger RNA biogenesis [BR:
sabu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MBM09_01245 (rnc)
Ribosome biogenesis [BR:
sabu03009
]
Eukaryotic type
90S particles
RNase
MBM09_01245 (rnc)
Prokaryotic type
rRNA processing factors
MBM09_01245 (rnc)
Chromosome and associated proteins [BR:
sabu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
MBM09_01245 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
HemeBinding_Shp
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ULC59615
LinkDB
All DBs
Position
complement(297376..298116)
Genome browser
AA seq
246 aa
AA seq
DB search
MKHIRNILNSRFKRNGNFFMELNKILGFKPKHLKFYKKAFTHRSMNIKDSKGNAINYERL
EFLGDAMLSSVIASHLYLEVPSGDEGYLTKMRSKIVSREHLNELGRDLKLIDLVVSKIPS
GQFGDNIHGNLFEALVGAIFLDKGYKYCEKFIYKRVIIPYVDIETLEGKVISYKSLLIEW
CQKEKKTFGYNVYEDTGNDDVRHFSVKLSIDDKVVAKARATSKKKAEEKASKRAFFAFQN
KMSKMI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacattcgtaacatattaaattcccgttttaaacgcaacgggaatttttttatg
gaattaaataagattttaggatttaaacctaaacacctaaaattctacaaaaaagccttt
acccatcgctcgatgaatattaaagatagtaaaggtaacgctattaactatgagcggttg
gagtttttaggagatgctatgttaagttcggtaatagcatcacacttatatcttgaggtg
ccaagtggagatgagggctacttaaccaaaatgcgatctaaaattgtaagtagagaacat
ttaaacgaattaggtagagatttaaaactgatagacttagttgtaagtaaaataccctct
ggtcaatttggagacaatattcatggcaacttgtttgaagctcttgttggagctattttt
ttagataaaggctataagtattgtgaaaaatttatttacaaacgcgttattattccttat
gtagatattgaaacccttgaaggcaaagttattagttataaaagtttgcttattgagtgg
tgccaaaaagaaaagaaaacctttggctataatgtttatgaagacactggtaatgatgat
gttaggcatttttcagtaaaactttcaatagacgacaaagtggttgctaaagccagagca
acttctaagaaaaaagcagaagaaaaagcttcaaaacgcgctttttttgcctttcagaac
aaaatgtctaaaatgatttag
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