Flaviramulus sp. BrNp1-15: MBM09_01360
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Entry
MBM09_01360 CDS
T07901
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sabu
Flaviramulus sp. BrNp1-15
Pathway
sabu03410
Base excision repair
sabu03430
Mismatch repair
sabu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sabu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MBM09_01360 (recJ)
03430 Mismatch repair
MBM09_01360 (recJ)
03440 Homologous recombination
MBM09_01360 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sabu03400
]
MBM09_01360 (recJ)
DNA repair and recombination proteins [BR:
sabu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MBM09_01360 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MBM09_01360 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MBM09_01360 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Ty3_capsid
PAS_6
Motif
Other DBs
NCBI-ProteinID:
ULC59636
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All DBs
Position
complement(322240..323931)
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AA seq
563 aa
AA seq
DB search
MRWTLKAKPETKEVKALEEALQVDATVATLLLQRGIKTYEEAKHFFRPSLKHLHDPFLMK
DMDKAVVRIEEAIANKENILVYGDYDVDGTTAVSLMSSYLKTKHNLVYTYIPNRYDEGYG
VSYKGINFALENDFSLIIALDCGIKSVDKVAHAKTLGIDFIICDHHRPGDEVPDAVAVLD
PKQEDCNYPYKELCGCGVGFKLIQALASKEGKTAEDLTEYLDLVATAIGADIVPIDGENR
VLAYFGLQVINSNPRPGIKAILEQVEKTELTITDVVFIVAPRINAAGRMEHGNYAVTLLT
EEESDLAEKYAAEINNYNLERRETDKQITEEALNQIKEQKEQERLTTVVYHENWHKGVIG
IVASRLTETYYRPTLVFTRSGDKLAASARSVKGFDVYNALEACSEHIEQFGGHKYAAGLT
LKEENYEAFKQAFEDEVSKTIDRNLLTPEIHVDCKIDIDNITPKFYRILKQFAPYGPSNM
TPIFMTNNLIDTGYAKCVGEDKTHLRLTATQPNTNKRFVGIGFSMADKFDIVSNGKPFKA
VYSIDENEWQGKVSLQLKLRDIK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggactttaaaagctaaaccagaaacgaaagaagttaaagctttagaagaagca
cttcaagttgatgctactgttgcaacattattgttgcagcgtggtattaaaacgtatgaa
gaagcgaaacatttttttagacctagtttaaagcatttgcacgatccatttttgatgaaa
gatatggataaagcagttgtacgcattgaagaagctatagcaaataaagaaaatatttta
gtgtatggtgattatgatgttgatggaactacagctgtttctttaatgtcatcctactta
aaaaccaaacataatctcgtttacacctatattcctaatagatatgatgaaggttatggt
gtttcatataaaggtataaactttgccttagaaaacgatttttcacttattatagcactg
gattgtggaataaaatctgtagataaagtagctcatgctaaaacattagggatcgatttt
ataatatgcgatcaccatagaccaggtgatgaagtaccagatgcagttgctgttttagac
ccaaaacaagaagactgtaattatccttataaagaattatgcggttgtggagttggtttt
aaactcatacaagcattagcatcaaaagaaggaaaaacagctgaagatttaactgagtat
ttagatttggtagctactgcaattggagcagatattgtgccaattgatggagaaaataga
gtacttgcctattttggattacaagttataaactcaaatccaagaccaggtattaaagct
attcttgaacaagttgaaaaaacagaattaactattaccgatgttgtttttatagttgcg
ccacgaataaatgctgccggacgaatggaacatggtaattatgcagtgactttattaaca
gaggaagagagtgatttggcagaaaagtatgcagctgaaatcaacaactataatctagaa
aggcgtgaaacagataagcaaattacagaagaagctcttaatcaaattaaggaacaaaaa
gaacaggaacgtcttactactgttgtttaccatgaaaattggcataaaggcgttattggt
attgtggcttctagattaaccgaaacctattatagacctactttagtttttacaagaagt
ggagataagttggcggcatcggcacgttctgtaaaaggttttgatgtttacaatgcttta
gaggcttgtagtgaacatatagagcaatttggagggcataaatatgctgcgggattaacg
cttaaagaagaaaattacgaagcctttaaacaagcttttgaagatgaggtttctaaaact
attgatagaaatttgctcacacccgaaatacatgttgattgtaaaatagatattgacaat
attactccaaagttctacagaattttaaaacaatttgcaccttacggaccaagtaatatg
acgcctatttttatgacaaataatttaatagatacaggttatgctaaatgtgttggtgaa
gacaaaacacatttaaggcttacagctacgcaaccaaatacaaacaaaagatttgttggt
attggttttagtatggcagataagttcgatattgtatcaaatggaaaaccatttaaggca
gtttattctattgatgaaaatgaatggcaaggaaaagtaagtttacaacttaaattaaga
gatattaaataa
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