Flaviramulus sp. BrNp1-15: MBM09_04545
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Entry
MBM09_04545 CDS
T07901
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sabu
Flaviramulus sp. BrNp1-15
Pathway
sabu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sabu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MBM09_04545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sabu03021
]
MBM09_04545
03400 DNA repair and recombination proteins [BR:
sabu03400
]
MBM09_04545
Enzymes [BR:
sabu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MBM09_04545
Transcription machinery [BR:
sabu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MBM09_04545
DNA repair and recombination proteins [BR:
sabu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MBM09_04545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ULC60261
LinkDB
All DBs
Position
1009833..1010825
Genome browser
AA seq
330 aa
AA seq
DB search
MAVFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRIE
GVDHEFSAIAGVVEDVTEIILNLKQVRFKRQIEDIDNESISISISGQERITAGDFQKFIS
GFQVLNTELVICNLDPKVNLNMEITIEKGRGYVPAEENKKAAAPVGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIITDGSITPQDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLIDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttaattttcaaaaaccagacaaagtaatcatgattgattctactgatttc
gaaggtaaattcgaattcagacctttagaacctggttatggtttaacagttggtaatgca
ttaagaagagtattactttcttctttagaaggatttgcaattacatcagttagaatagaa
ggtgtagatcatgagttttcagcaattgctggtgtggttgaagatgttacagaaatcata
ttaaacttaaaacaagtacgttttaaaagacaaattgaggatattgataacgaatcaatt
tcaatttcaatttctggtcaagaacgtattacagctggagattttcaaaagtttatttca
ggattccaagtattaaatacagaattagtaatctgtaacttagatcctaaagtaaattta
aatatggaaattactattgaaaaaggtagaggttatgtacccgcagaagaaaacaaaaaa
gctgctgcaccagttggtactatttttacagattcaatttatactccaataaaaaacgtt
aagtatagtattgaaaactatcgtgttgaacaaaaaactgattatgaaaaattagttttt
gaaatcattactgatggttcaattactccacaagacgctttaactgaagcagcaaaaaca
ttaattcaccatttcatgttattctctgacgagcgtattacattagaagctgatgaaatt
gcacaaactgaaacttatgatgaagaatcacttcatatgagacagttgcttaaaactaag
ttaatcgatatggatttatctgtacgtgcgcttaactgtttaaaagctgcagaagtagat
actttaggagacttagtatcattcaacaaaaatgatttaatgaaattcagaaacttcggt
aagaagtctttaacagagcttgaagagcttgtaaatgttaaaggattaaatttcggaatg
gatttaagcaaatataaattagataaagattaa
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