Flaviramulus sp. BrNp1-15: MBM09_05380
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Entry
MBM09_05380 CDS
T07901
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sabu
Flaviramulus sp. BrNp1-15
Pathway
sabu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sabu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MBM09_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sabu03021
]
MBM09_05380
Transcription machinery [BR:
sabu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MBM09_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ULC60418
LinkDB
All DBs
Position
complement(1203506..1204369)
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQIALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKTFAFLEQSHERPPSAEEIAKELDMTINDVKESMKNSGRHV
SMDAPLVEGEDSNLYDVLNSGESPNPDKELLHESLRTEIERALETLTPREADVIRLYFGL
GNQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattacgaagcaggtaaccaatagagaaaccgcttcgttagataaa
tatctgcaagaaattggaaaagttgacttaattaccgcagacgaagaagtagaattagca
caacgcattaaagcaggagatcaaattgctttagaaaaattaacaaaagctaatttacgt
ttcgtagtatcggtagctaagcaataccaaaaccaaggtttaacattaccagatttaatt
aatgaaggtaatttaggtttaatcaaagcggctcaacgttttgatgaaacacgtggtttt
aaatttatttcttatgctgtttggtggattcgtcaatcgattcttcaagctttagctgaa
caatctcgtattgtacgtttaccattaaataaaattggttctattaacaagattaataaa
acatttgcctttttagagcaaagtcatgagcgtccaccttctgctgaagaaatcgcaaaa
gaattggatatgacaattaacgatgttaaagagtctatgaaaaattctggtcgtcatgta
agtatggatgcgcctctagttgaaggagaagattccaacttatacgatgtactaaacagt
ggagaatctccaaacccagataaagaattattacacgaatctttacgtacagaaattgag
cgtgctttagaaacattaacgcctcgtgaagcagatgtaattcgtttatattttggttta
ggaaaccagcacccaatgactctagaagaaattggtgaaacgttcgatttaactagagaa
cgtgtacgtcaaataaaagaaaaagctattcgtagattaaaacatacgtctagaagcaaa
atattgaaaacatatttaggatag
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